SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for ENSXETP00000013177 from Xenopus tropicalis 69_4.2

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  ENSXETP00000013177
Domain Number 1 Region: 1-473
Classification Level Classification E-value
Superfamily Periplasmic binding protein-like I 9.42e-113
Family L-arabinose binding protein-like 0.00000929
Further Details:      
 
Weak hits

Sequence:  ENSXETP00000013177
Domain Number - Region: 483-540
Classification Level Classification E-value
Superfamily Growth factor receptor domain 0.00925
Family Growth factor receptor domain 0.011
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) Protein: ENSXETP00000013177   Gene: ENSXETG00000005986   Transcript: ENSXETT00000013177
Sequence length 808
Comment pep:known scaffold:JGI_4.2:GL172826.1:1400776:1411871:-1 gene:ENSXETG00000005986 transcript:ENSXETT00000013177 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence
GDITLGGLFSLHMSNSESFACCEKRFHIRYYRFLLAMVYAILEINASDDLLPNVTLGFKL
YDSCYNELKSLTGTKWILSGRKNTVPNFNCNKHSMPLAIIGDMLSKASIPIARILGLYRY
PQVSYASASPSLSDKTQFPSFLRTIHNSYYGCFNIVDLLKYFNWTWVGIIVSDNDLGRTS
LQIATREYERNGGCIAFQEILPIFPSMNSVLRIVDVVKKSKATVIVLFCTTENLVSLMEQ
ASFHNITNKVWVGTSGWTITSDFPRTDILTTLNGSLALAPQTGKIPGLKEFLYSIHPSRF
PDDPYMKSFWETAFHCIWPGNDAVNSTSPALLKEDIVWCTGEERLDSIDPNIYDVYNFKY
TYKVHNAVFAVAHALHLMKNCVPGKGPFKNGSCADIYNHRPWQLLHYIKRVDFKNTAGER
IFFDENGDVSISVDILNWQLFPNGSNRYVYIGSIDTGAPKGKEINIQLNKILWNTGNSEV
PVSICSDPCPKGYRRAAIQGQKICCFDCLPCSEGQNSLDDSECLKCPEDKWPDSRKEECL
PKPIKFLSYEEALGSALACISVLFCLLTFSVFCLFIIKRKTPIVKANNRDLSYLLLISLM
VGFLCPLAFIGRPNQIMCMIRQVMFAVIFSLCVSAILAKTITVVMIFSATNPNSKINKLV
GFRIPVYIVPVCTVIQIILCIVWLAQAAPFAEFNMAAEIGIIVIECNEGSRVLFACVLGY
MGLLASVSLLVAFMARKLPDTFNETKFITFSMLVFASVWVTFIPAYLSTKGKQTVAVEIF
AIVSSSAGLLVCVFSPKCYIILLHPEMN
Download sequence
Identical sequences L7N2V9
ENSXETP00000013177 ENSXETP00000013177

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]