SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for ENSXETP00000038393 from Xenopus tropicalis 69_4.2

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  ENSXETP00000038393
Domain Number 1 Region: 622-771
Classification Level Classification E-value
Superfamily Toll/Interleukin receptor TIR domain 7.59e-45
Family Toll/Interleukin receptor TIR domain 0.00000593
Further Details:      
 
Domain Number 2 Region: 5-135,348-528
Classification Level Classification E-value
Superfamily L domain-like 2.79e-37
Family Ngr ectodomain-like 0.014
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) Protein: ENSXETP00000038393   Gene: ENSXETG00000017689   Transcript: ENSXETT00000038393
Sequence length 774
Comment pep:known scaffold:JGI_4.2:GL173625.1:215896:218217:1 gene:ENSXETG00000017689 transcript:ENSXETT00000038393 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence
SQNSCQVDEKQKYANCQGQNLNDVPKDLPVTLEVLDLSCNWISQIRVDDFSSYTNLQALN
LSFNNISTIDNSSFASNTQLRNLTLFNNGLTEMPSTLLEPLLLLEVLDLSDNLYNYSTLG
KVFKTLANLRSLSIGGPFVSKVLRGDFVPIKNISLQKFELKTRSSLRFYQTGAFSVLNTD
VLVLVMTLDTNPKVLPMILKDLAGKSLDILSFGNLFEHNYYAGPTNPFSSLPDINVRELI
FNRGKVNQKLLQLILETIQTSSIQDLSLLSVDFDYSDVRTTVDVKMDNLFLRSLVIKDAT
NPDILTFDQTFTWFSKVSNLYIINVNFNFAQCDTWSQMKNVERLDIRNNLLLSSDLYNPS
CKYGELPKLHTFTAANNNLQILKPISLLTANWPKLSSLDLSSNYIGSEDENCSWTPNITT
FILKNNLLTPGVFTCLPTTVRYLDLSNSRLESLDMDYFSNATNLKTLVLSYNKLTSISSN
WSNPFLQVLFLDNNIISIIDKGSFNNLPQLRTLTAGNNPYHCTCDLYSFFSDVLGKNKIT
ISDWPQSYCCYHPQQLRNTRVDIYTPGSIECNVGLLVAITVSTTAVVVIACMIMCWRLDA
PWYFRMMCHIVKSKYRSKKANDSREYNYHAFISYSYSDADWVRGELLYRLESCSPPYRVC
IHERDFLPGRWIIDNIIDNIETSRKTIFVLSHNFVNSEWCNYELYFAHQRAIGHSFEDVI
LVVKENVTLKDLPKRFHKLRKMLRKKTYLEWPSEPSKQHFFWIQLKNILGSPST
Download sequence
Identical sequences F7ALI0
ENSXETP00000038393 ENSXETP00000038393

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]