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  Home > Genomes > Xenopus tropicalis 69_4.2 > ENSXETP00000049993

Domain assignment for ENSXETP00000049993 from Xenopus tropicalis 69_4.2

Domain architecture

Domain assignment details

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Strong hits

Sequence:  ENSXETP00000049993
Domain Number 1 Region: 1193-1269
Classification Level Classification E-value
Superfamily Immunoglobulin 4.71e-18
Family I set domains 0.011
Further Details:      
 
Domain Number 2 Region: 1290-1368
Classification Level Classification E-value
Superfamily Immunoglobulin 4.86e-17
Family I set domains 0.0089
Further Details:      
 
Domain Number 3 Region: 881-948
Classification Level Classification E-value
Superfamily Immunoglobulin 0.00000000000029
Family I set domains 0.078
Further Details:      
 
Domain Number 4 Region: 1398-1482
Classification Level Classification E-value
Superfamily Immunoglobulin 0.00000000000153
Family I set domains 0.021
Further Details:      
 
Domain Number 5 Region: 660-727
Classification Level Classification E-value
Superfamily TSP-1 type 1 repeat 0.000000000249
Family TSP-1 type 1 repeat 0.0026
Further Details:      
 
Domain Number 6 Region: 527-581
Classification Level Classification E-value
Superfamily TSP-1 type 1 repeat 0.00000000103
Family TSP-1 type 1 repeat 0.0037
Further Details:      
 
Domain Number 7 Region: 430-490
Classification Level Classification E-value
Superfamily TSP-1 type 1 repeat 0.00000000183
Family TSP-1 type 1 repeat 0.0043
Further Details:      
 
Domain Number 8 Region: 375-435
Classification Level Classification E-value
Superfamily TSP-1 type 1 repeat 0.00000000615
Family TSP-1 type 1 repeat 0.0036
Further Details:      
 
Domain Number 9 Region: 1537-1604
Classification Level Classification E-value
Superfamily TSP-1 type 1 repeat 0.0000000103
Family TSP-1 type 1 repeat 0.0029
Further Details:      
 
Domain Number 10 Region: 727-787
Classification Level Classification E-value
Superfamily TSP-1 type 1 repeat 0.0000000314
Family TSP-1 type 1 repeat 0.003
Further Details:      
 
Domain Number 11 Region: 31-79
Classification Level Classification E-value
Superfamily TSP-1 type 1 repeat 0.0000000523
Family TSP-1 type 1 repeat 0.0018
Further Details:      
 
Domain Number 12 Region: 782-846
Classification Level Classification E-value
Superfamily TSP-1 type 1 repeat 0.0000000824
Family TSP-1 type 1 repeat 0.0036
Further Details:      
 
Domain Number 13 Region: 607-664
Classification Level Classification E-value
Superfamily TSP-1 type 1 repeat 0.000000102
Family TSP-1 type 1 repeat 0.0048
Further Details:      
 
Domain Number 14 Region: 1658-1722
Classification Level Classification E-value
Superfamily TSP-1 type 1 repeat 0.000000222
Family TSP-1 type 1 repeat 0.0045
Further Details:      
 
Domain Number 15 Region: 294-357
Classification Level Classification E-value
Superfamily TSP-1 type 1 repeat 0.000000419
Family TSP-1 type 1 repeat 0.0067
Further Details:      
 
Weak hits

Sequence:  ENSXETP00000049993
Domain Number - Region: 1487-1542
Classification Level Classification E-value
Superfamily TSP-1 type 1 repeat 0.00235
Family TSP-1 type 1 repeat 0.0061
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) Protein: ENSXETP00000049993   Gene: ENSXETG00000023109   Transcript: ENSXETT00000049993
Sequence length 1759
Comment pep:known scaffold:JGI_4.2:GL172798.1:502800:658689:-1 gene:ENSXETG00000023109 transcript:ENSXETT00000049993 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence 
TCVQSHPGTSLFFIDYPMQSSRTARSEEDRDTLWDAWGSWSECSRTCGGGASYSLRRCLS
SKSCEGRNIRYRTCSNVDCPAESGDFRAQQCSAHNDVKYQGLYREWLPVHNDPENPCSLK
CQAKGTALVVELAPKVLDGTRCYTESLDMCISGVCQIVGCDHQLGSTAKEDNCGVCNGEG
STCRLVRGTYKSQLSANKLDDTVVVIPYGSRHVRLVLKGPDHLYLETKTLQGIKGENSLS
NTGSFLVDNTSVDFQRFPDKEILRMAGPLSADFSVKVHYAGAADSVVQFIFYQPIIHRWR
ETDFFPCSASCGGGYQLTSAECYDLRSGRVVADQYCNYYPENVKPKPKLQECNMDPCLAS
DGYKQIMPYDLYHPLPRWENTPWTACSSSCGGGIQSRTVSCVEEDIHGQISSVEEWKCMY
TPKMPIVQPCNIFDCPKWLAQEWSPCTVTCGHGLRYRVVLCIDHRGIHTGGCSSKTKPHI
KEECTVHIPCYKAKEKLPVEAKLPWYKQAQELEEVTAVSEEPSFIPEPWSPCSVSCGVGI
QHRTVKCQVLLTFAQTIADLPLEECEGTKPATQQTCYSGPCNGEAMDYNPDEDELSYGGL
KDIEELYDWEYEGFTECSESCGGGLQEAIVVCLNKQTRVTVGESLCVASRRPPPLLKSCN
MEACPPSRWEIGNWSTCSLTCGVGLQTRDVFCSHLISRETNETVVLGDDFCRQPKPTLVQ
ACNRFDCPPAWYSSEWKQCSQTCGGGIHTREVLCKQRLSDGSILELPETFCSSSKPPSQD
LCENEDCPGEWHITDWSQCSVTCGEGTQIQNAVCRKKLKTGQYIVGNSSMCPSINLLVRP
CSLATCTRSKHGHKQSPQITGLRKLYIQTRRQKKLQFVVGGYAYLLPKTSLVLRCPVRRF
RKPQIIWEKDGKHLISSEHVTVAPHGYIKIHNLRPSDTGIYTCMAGPSQEHFIIKLIGDN
NKIISHSSRTREEEVAKKGRKNEAYHRTEKQQNASLFNRSKTEKQGQITDPSSVYDSIVS
HLLALKVLSDRNIDPPEHQESFEKNISAEEDHVVEHSLPYTFVTELKRLDDIIRSLSQQP
VELQDNFSRQILLQLTQDMRSHSESHESPVFKTDLKQIGPGTSEHSLYKPVSGLSSSWRS
SSVEAELSESYESLHMLRKPVILRKISAAQQFSASEVVTHIGQTVALASGTLSVLLHCEA
GGNPKPVISWAKNGEEVKYSNRILLKSDDSLQILEPVEADVGFYTCNATNSLGYASVSIA
ITLAGKPLIKTSKSVVINTDAPSISVDVGSVVKTIQGTNVSIHCQVAGLPEAEVSWYRNK
SRLHSISHHSDASLSIGNVTKSDQGFYTCRAANVHGEVAESTQLQILDFKNYGVERLRTL
FAEIGSGTPSVMASPTGNNLMVNLGGSALIGCPLKGHIMPNISWIHESQPLGTNVRLRHE
LLENGQILRLTNISKDHQGEYRCIIKNPSESVIQRAFLSIQASREYQWSAVGFTPCSASC
GNRGIQHPQLRCVLDKEEVNISYCLEKPRPSIKPTACNRRDCPARWMVTSWSSCSQSCGG
GFQTRRVTCQKLTSMGLPVAVANDACTVFSKRPVDSQSCSRQLCVEWTTSPWGQSSSTCF
TCRALIVTTDMFCCSDIDSNIFSRKCISLTRPLNTQNCWADICSVHWRVSAWTLCTATCG
NYGFQSRRVECVHHRTNKSVPDHLCSWRSRPINWQRCNITPCENIDCRDTTRYCEKVKQL
KLCQLAQFRSRCCGTCGKA
Download sequence
Identical sequences F6YFJ8
ENSXETP00000049993 ENSXETP00000049993

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]
Please cite: Gough, J., Karplus, K., Hughey, R. and Chothia, C. (2001). "Assignment of Homology to Genome Sequences using a Library of Hidden Markov Models that Represent all Proteins of Known Structure." J. Mol. Biol., 313(4), 903-919.

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