SUPERFAMILY 1.75 HMM library and genome assignments server

Superfamily is undergoing a server migration - you are now browsing on the new server. Please contact us if you experience any problems.

Domain assignment for ENSXETP00000063471 from Xenopus tropicalis 69_4.2

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  ENSXETP00000063471
Domain Number 1 Region: 410-467
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 8.67e-24
Family Classic zinc finger, C2H2 0.0046
Further Details:      
 
Domain Number 2 Region: 634-691
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 1.21e-23
Family Classic zinc finger, C2H2 0.0068
Further Details:      
 
Domain Number 3 Region: 690-747
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 2.16e-23
Family Classic zinc finger, C2H2 0.0068
Further Details:      
 
Domain Number 4 Region: 242-299
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 2.1e-22
Family Classic zinc finger, C2H2 0.0089
Further Details:      
 
Domain Number 5 Region: 802-859
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 5.21e-22
Family Classic zinc finger, C2H2 0.0078
Further Details:      
 
Domain Number 6 Region: 579-635
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 3.02e-21
Family Classic zinc finger, C2H2 0.0088
Further Details:      
 
Domain Number 7 Region: 354-411
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 1.74e-20
Family Classic zinc finger, C2H2 0.007
Further Details:      
 
Domain Number 8 Region: 844-896
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 2.1e-20
Family Classic zinc finger, C2H2 0.0042
Further Details:      
 
Domain Number 9 Region: 299-355
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 3.23e-20
Family Classic zinc finger, C2H2 0.0067
Further Details:      
 
Domain Number 10 Region: 746-803
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 2.09e-19
Family Classic zinc finger, C2H2 0.012
Further Details:      
 
Domain Number 11 Region: 186-242
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 3.72e-19
Family Classic zinc finger, C2H2 0.0097
Further Details:      
 
Domain Number 12 Region: 522-578
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 8.3e-18
Family Classic zinc finger, C2H2 0.012
Further Details:      
 
Domain Number 13 Region: 466-523
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 0.00000000000000342
Family Classic zinc finger, C2H2 0.016
Further Details:      
 
Domain Number 14 Region: 2-51
Classification Level Classification E-value
Superfamily KRAB domain (Kruppel-associated box) 0.00000000000000955
Family KRAB domain (Kruppel-associated box) 0.0024
Further Details:      
 
Weak hits

Sequence:  ENSXETP00000063471
Domain Number - Region: 139-165
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 0.00458
Family Classic zinc finger, C2H2 0.037
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) Protein: ENSXETP00000063471   Gene: ENSXETG00000023932   Transcript: ENSXETT00000065605
Sequence length 903
Comment pep:known scaffold:JGI_4.2:GL173523.1:191875:195196:-1 gene:ENSXETG00000023932 transcript:ENSXETT00000065605 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence
MVLVQVHVSFEEVAVFFSDEEWQHLDVWQKELYNEVMQDILETLLSLGRVTMPMRYSLMP
QWRVNEGAKPNVYSCSVTARQIHDHGINRDMLGNLNHRFLEWEDLASLGQLTAYSKDNVH
CNDQYALLQDRHNCMLRILYQCSECQEIFPSQSLFDAHKVRHTANSWNLLGTSSSMAMPS
REIKRFSNLSNLMEHERSHQERKAFICSECGKSFHRHSILKVHLRIHTGERPYACPDCGR
RFSQRFNVVIHQRIHTGERPYQCPKCNKSFRYQTTLLRHEKRTHTGEKPYMCNECGKKFS
QRFNLVVHQRIHSDEKPYQCHKCGKDYRYRTALLRHQRSHTGEKPYVCEKCSRAFSQRSN
LLVHERLHTGEKPFKCPECDEGFRYRSGLEKHRKLSTGDRPYVCAECGKSFIRMSKLTVH
RRTHTGERPYICAECGKQFSQQSNLVVHQRIHTGERPFKCTECEKTFRYQSALIKHRRNH
SDKKLHKCLECKKVFGSWSHLLAHRRTHDREKIHKCSECEKTFSNQSVLSLHLRTHTGEK
IFKCTECEKSFMKRAQLVVHKKCHIEERPYKCTLCEKGYNQHSKLIEHLRTHTGEKPFTC
TECKKSFTKRSHLTEHLRIHTGGKPYKCNLCEKTFHYPSNLVEHQRTHTGDRPYQCTECD
KSFIKMSKLIVHLRIHTGEKPYKCNECNKSFSQQSNLVVHQRTHTGERPFQCSHCKKSFS
YHYALVVHQRTHTGEKPYQCSLCDKAFSQQSNLKLHQKTHESKKQHKCTECDKCFLEKSK
LIVHQRTHTGERPFKCSVCDKTFIQWSHLSQHRKIHRGDRPYVCAECGKSFIRMSKLTVH
RRTHTGERPYICAECGKQFSQQSNLVVHQRIHTGERPFKCTECEKTFRYQSALIKHRRNH
SGD
Download sequence
Identical sequences F7DNN1
ENSXETP00000051628 ENSXETP00000063471

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]