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Domain assignment for gi|147898733|ref|NP_001079338| from Xenopus laevis

Domain architecture


Domain assignment details

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Strong hits

Sequence:  gi|147898733|ref|NP_001079338|
Domain Number 1 Region: 588-794
Classification Level Classification E-value
Superfamily Fibronectin type III 1.4e-33
Family Fibronectin type III 0.00061
Further Details:      
 
Domain Number 2 Region: 797-972
Classification Level Classification E-value
Superfamily Fibronectin type III 5.08e-24
Family Fibronectin type III 0.00055
Further Details:      
 
Domain Number 3 Region: 227-320
Classification Level Classification E-value
Superfamily Immunoglobulin 5.73e-20
Family I set domains 0.0011
Further Details:      
 
Domain Number 4 Region: 493-593
Classification Level Classification E-value
Superfamily Immunoglobulin 8.44e-18
Family I set domains 0.018
Further Details:      
 
Domain Number 5 Region: 404-495
Classification Level Classification E-value
Superfamily Immunoglobulin 1.03e-17
Family I set domains 0.014
Further Details:      
 
Domain Number 6 Region: 315-395
Classification Level Classification E-value
Superfamily Immunoglobulin 0.00000000000000464
Family I set domains 0.00026
Further Details:      
 
Domain Number 7 Region: 24-119
Classification Level Classification E-value
Superfamily Immunoglobulin 0.000000000000146
Family I set domains 0.00033
Further Details:      
 
Domain Number 8 Region: 118-212
Classification Level Classification E-value
Superfamily Immunoglobulin 0.0000000000131
Family I set domains 0.00025
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) gi|147898733|ref|NP_001079338|
Sequence length 1005
Comment contactin 1 [Xenopus laevis]
Sequence
MWPLVTQLVIYFFFCWAEEGKRYGPVFEEQPIDTIFPEESTEGKVSVNCRARGNPPPIYK
WRKNNLEIDLLNEHYSLVGGNLVINNPDKYKDSGRYVCIVSNIYGKVWSREATLNFGYLD
PFPTEERYEVKVKEGTGAVLICDPPPHVPDDLNYRWLLNEFPVFLSPDNRRFVTQTNGNL
YIAKVEHLDRGNYSCFVSSPSVTKSVFSKFISLLPQTDTSEKPKRYTPVINVKFKDTRAL
KDQNVTLECFALGNPVPVITWRKINEAMPASADISMSGAVLKIFNVQPEDEGTYECEAKN
IKGLDNHRAYVYVEGVPEWVEHINDTERDIGSDLHWACVARGKPQPSIRWLKDGAPYGKG
DIIKKGLTLEDAGMYQCIAENIHGIIYANAELKILALAPTFEFTPMRKKVLAAKGGRVII
ECKPKAAPKAKFSWSKGTELLINNSRVSIWDDGSLEITNITKFDEGSYTCFAENDRGKAN
STGIVSVTAATKITLAPSNADVTVGENATMQCHASHDPTLELTFIWALNGFPIEFDKEDG
HYERAIRNVVGSELVIKNAQLIHAGRYTCTAQTIVDNSSASADLVVRGPPGPPGGVRVEE
IRDTSVKLTWSSGTDNHQPISKYNIQAQNILSEDWKDVKTENPNIEGNMEMARVIDLIPW
MDYEFRVIATNTLGVGEPSLPSPKIRTEGAAPIVAPAEVGGGGGSNRELTITWQPLSREY
HYGDGFGYGVAFKPFNGREWRKVIVTNPESGHYVHKDDTITPATQFQVKVKAFNKIGEGP
YSSTVVVYSAEDVPTEAPTAVVYNILSSSEVSVAWHPVYEKSIEGYQVRYWRIQDKEAAA
HRVQVKASDITTRLEGLMPNTHYNIEVRAFNSAGDGPPSKTLTFLTKKAPPSQIPQITSA
VRYGSQYIITWEHVVPLSNESAVNGYKVLYRQDGQRDGKLYSTRKHSVELPVPEEGVYVV
EVRAHSEGGDGAVGFITISGVATGILPSVLGVLLPILSLLMYLEF
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Identical sequences P79921
gi|147898733|ref|NP_001079338| gi|1843425|gb|BAA13100| NP_001079338.1.7800

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