SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for gi|148226863|ref|NP_001079948| from Xenopus laevis

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  gi|148226863|ref|NP_001079948|
Domain Number 1 Region: 25-516
Classification Level Classification E-value
Superfamily Sema domain 2.88e-171
Family Sema domain 0.000000000214
Further Details:      
 
Domain Number 2 Region: 512-563
Classification Level Classification E-value
Superfamily Plexin repeat 0.0000000000349
Family Plexin repeat 0.0018
Further Details:      
 
Domain Number 3 Region: 579-657
Classification Level Classification E-value
Superfamily Immunoglobulin 0.00000000114
Family I set domains 0.021
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) gi|148226863|ref|NP_001079948|
Sequence length 695
Comment hypothetical protein LOC379639 [Xenopus laevis]
Sequence
MLVSALPSLLLLLLNLPPCVRTTQPPRVYLSYRDLMESRSARSFTFGFNTSDYRILLLDQ
DQDRMYVGSRDYVLSLDLGNVNREPLIIHWPAPLNRHKECLMAGRGRVDECYNYLRVIQP
LNRTHLYACGTGAYQPQCAVIYRGWRSEDYVFRIVPGSLESGKGRCPYDPKQENMATLID
GVLYAGVQVDYMGTDSAIFRTMGHKPPIRTEQYDSRWLNDPLFVGSLVVSESSFKEDDKL
YILFRERSLEGENGPAVLSRIARVCLNDEGGLRSLVGKWTSYLKARLVCSVIGQDGVETS
FDQLRDVFIQPTHNKQNPLIYGVFTTLGSVFRGSAVCVYSLADVRAVFNGPFTHKEGHGY
QMTAYSGKTPYPRPGACAGGFSVPRNRSSRNFGEDVLRFVRTHPLMYSSVYPVNRRPLLL
LSDASYTYTSIAVDKVPAADGEYTVLFLGTDRGTVQKVMILPRGIKETESITLEEVEVFK
VPSPIRNLRISSKRHQLYVSSDVGVTQLSLHRCGRYGDSCADCCLARDPYCAWDGKGCVR
YTPSPSRRSRRQDVKHGDPLRQCRGYNTQVDRGILERLQIGVEGGSVFLQCDTHSPLESV
TWLLQREDSQHRREVRLTSIDGGAVLRSVHASDAGVYTCTGTENGFRRSRGKIRLNVLPR
DLLEKLTAVPTLAPMPAQCLPPRRPRPRPSQTERN
Download sequence
Identical sequences Q6PF60
NP_001079948.1.7800 gi|148226863|ref|NP_001079948| gi|34784601|gb|AAH57717|

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]