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Domain assignment for gi|148229739|ref|NP_001079994| from Xenopus laevis

Domain architecture


Domain assignment details

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Strong hits

Sequence:  gi|148229739|ref|NP_001079994|
Domain Number 1 Region: 39-387
Classification Level Classification E-value
Superfamily L domain-like 5.7e-60
Family Ngr ectodomain-like 0.09
Further Details:      
 
Domain Number 2 Region: 426-518
Classification Level Classification E-value
Superfamily Immunoglobulin 4.27e-19
Family I set domains 0.04
Further Details:      
 
Domain Number 3 Region: 531-601
Classification Level Classification E-value
Superfamily Fibronectin type III 0.00000255
Family Fibronectin type III 0.0039
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) gi|148229739|ref|NP_001079994|
Sequence length 718
Comment leucine rich repeat neuronal 1 [Xenopus laevis]
Sequence
MARISVLVLTACQLLLGLLTSSLTDSSAPANECPQLCVCEIRPWFTPQSTYREATTVDCN
DLRLTKIPANLSLDTQVLLLQSNNIGKTNGELQRLVNLTELDLSQNNFTSIHDVGLSNLS
QLTTLHLEENQIFEMTDYCLQDLTNLQELYINHNQLNSISPSAFSGLRNLLRLHLNSNKL
RIIDSRWFESTPNLEILMIGENPVIGILDLNFQPLVNLRSLVLAGMYLSDIPGNALLGLD
NLESLSFYDNKLGKVPQLALQKVPNLKFLDLNKNPIRKIQEGDFKNMLKLKELGINNMAE
LVSVDRNAMENLPELTKLEATNNPKLSYIHRSAFRNVPTLESLMLNNNALNSVYRGTVES
LPNLREISIHSNPLRCDCVLHWMGSNQTSIRFMEPLSMFCALPPEYRGQPVKEALAQDPA
GEQCLPMISQDTFPSHLSLDIGMTISLDCRATAEPEPEIYWVTPLGHKVTLETLSDKYHL
SGEGSLQIFNVQVEDSGRYTCVAQNSEGADTKVATLRVNGTLLDGTQALRLYVQQAESSS
VLVSWKVSSSVLASNLKWSSATMKIDNPHITYTARVPADVHEYNLTHLQPATEYEVCLTV
SGLHQQAQRACINVTTKGTSYSLTVTDQETSAALAAVMGSLFALISFASVSVYAAKRFQR
KNYRHSLKKYMQKTSSIPLNELYPPLISLWEGDSEKEKEGTAESKASQVDTSRSYYMW
Download sequence
Identical sequences Q6PCK4
gi|148229739|ref|NP_001079994| gi|37590698|gb|AAH59292| NP_001079994.1.7800

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