SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for gi|3116227|gb|BAA25931| from Xenopus laevis

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  gi|3116227|gb|BAA25931|
Domain Number 1 Region: 492-694
Classification Level Classification E-value
Superfamily Fibronectin type III 4.2e-25
Family Fibronectin type III 0.0000275
Further Details:      
 
Domain Number 2 Region: 201-303
Classification Level Classification E-value
Superfamily Immunoglobulin 1.81e-21
Family I set domains 0.00017
Further Details:      
 
Domain Number 3 Region: 395-496
Classification Level Classification E-value
Superfamily Immunoglobulin 7.74e-20
Family I set domains 0.012
Further Details:      
 
Domain Number 4 Region: 299-402
Classification Level Classification E-value
Superfamily Immunoglobulin 5.42e-17
Family I set domains 0.01
Further Details:      
 
Domain Number 5 Region: 21-112
Classification Level Classification E-value
Superfamily Immunoglobulin 0.0000000000000153
Family I set domains 0.00025
Further Details:      
 
Domain Number 6 Region: 115-211
Classification Level Classification E-value
Superfamily Immunoglobulin 0.0000000000000533
Family I set domains 0.0000235
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) gi|3116227|gb|BAA25931|
Sequence length 725
Comment neural cell adhesion molecule [Xenopus laevis]
Sequence
MLHIKDLIWTLYFIGTAVALEVNIVPDQGEISLGESKFFLCQVSGEATDISWYSPTGEKL
VTQQQISVVRSDDYTSTLTIYNASSQDAGIYKCVASNEAEGESEGTVNLKIYQKLTFKNA
PTPQEFKEGEDAVIICDVSSSIPSIITWRHKGKDVIFKKDVRFVVLANNYLQIRGIKKTD
EGTYRCEGRILARGEINYKDIQVIVNVPPTIQARQLRVNATAKMAESVVLSCDADGFPDP
EISWLKKGEPIEDGEEKISFNEDQSEMTIHHVEKDDEAEYSCIANNQAGEAEATILLKVY
AKPKITYVENKTAVELDEITLTCEASGDPIPSITWRTAVRNISSEATTLDGHIVVKEHIR
MSALTLKDIQYTDAGEYFCIASNPIGVDMQAMYFEVQYAPKIRGPVVVYTWEGNPVNITC
EVFAHPRAAVTWFRDGQLLPSSNFSNIKIYSGPTSSSLEVNPDSENDFGNYNCTAINTIG
HEFSEFILVQADTPSSPAIRKVEPYSSTVMIVFDEPDSTGGVPILKYKAEWRVIGHEKWH
TKYYDAKEVNAESIITVMGLKPETSYMVKLSAMNGKGLGDSTPSQEFTTQPVYISKPQGE
PSAPKLVGHLSEDGNSIKVDILKQDDGGSPIRHYLVNYRALNALEWKPEMRVPSNSHHVM
LKALEWNVDYEVIVVAENQQGKSKPALLSFRTTAKPTATTANVGSSASSNVVPLLVCLVI
AIVPC
Download sequence
Identical sequences O73633
gi|3116227|gb|BAA25931|

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]