SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for gi|47940323|gb|AAH72368| from Xenopus laevis

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  gi|47940323|gb|AAH72368|
Domain Number 1 Region: 596-802
Classification Level Classification E-value
Superfamily Fibronectin type III 2.59e-33
Family Fibronectin type III 0.00063
Further Details:      
 
Domain Number 2 Region: 805-990
Classification Level Classification E-value
Superfamily Fibronectin type III 9.53e-25
Family Fibronectin type III 0.0000487
Further Details:      
 
Domain Number 3 Region: 310-403
Classification Level Classification E-value
Superfamily Immunoglobulin 4.14e-23
Family I set domains 0.00059
Further Details:      
 
Domain Number 4 Region: 421-505
Classification Level Classification E-value
Superfamily Immunoglobulin 7.69e-22
Family I set domains 0.035
Further Details:      
 
Domain Number 5 Region: 224-320
Classification Level Classification E-value
Superfamily Immunoglobulin 3.9e-20
Family I set domains 0.0019
Further Details:      
 
Domain Number 6 Region: 498-601
Classification Level Classification E-value
Superfamily Immunoglobulin 1.53e-17
Family I set domains 0.046
Further Details:      
 
Domain Number 7 Region: 123-205
Classification Level Classification E-value
Superfamily Immunoglobulin 0.0000000000000395
Family I set domains 0.00051
Further Details:      
 
Domain Number 8 Region: 22-114
Classification Level Classification E-value
Superfamily Immunoglobulin 0.0000000000000742
Family I set domains 0.0026
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) gi|47940323|gb|AAH72368|
Sequence length 1028
Comment MGC84491 protein [Xenopus laevis]
Sequence
MRLLWKLLAFPWFVCLADELTLQGPVFAQEPTNINFPLDSEDRTLRLVCDVQGHPKPVVR
WRVNGTLMDEAQDYRYRVLDRSLIIASPDRNRDVGTFQCEATNSLGTILSREAYVQFSYL
DSFQTRTRSTVSVREGQGMVLLCGPPAHSGELVYAWIFNEYPPFVQQDNRRFVSQVTGNL
YIAKVEPSDAGNYTCVVTNIITNTRELGPSTPLTLRTDGVMGEYEPKIEVHFPESVSSAK
GSTVKLECFALGNPVPTITWRRADGKPISRKVRRHRSSGVLEIPNFQQEDAGPYECVAEN
TRGKNMVRGQLTYFAPPSWVQKINDAHIAIEENILWECKASGRPKPSYTWLKNGQRLQSK
GRLQIDHGSLTITSVNISDSGMYQCLAENKHGTIYSSAELRVIAVGPDFSKGFVKRVTLG
KVGGSVLIECKPKASPKPSTTWKKGKELLKESPRISILDDGTLKISNLTKADAGSYTCTA
SNHFGTASSTGTLVVKDPTQVLVPPSSMDVTVGESIVLPCQVSHDHSLDISFSWVFNGQL
IDFQKDGEHFERVGGQDSAGDLMIRSIQLKHAGKYICLVHTSVDKLSAGADLIVRGPPGP
PDALTVEVIAETTAQLSWMPGVDNHSPIIMYSVQARTPFSVGWQAVSTVPEVVDGKSFSS
TVNGLSPWVEYEFRVIAINEIGIGEPSPPSDRRRTKDALPEVTPANVSGGGGSKGELVIT
WEPVPEELQNGGGFGYVVAFRPFGTISWMQTVVASADSSRYVYRNESLPPFSPYEVKVGV
YNNKGEGPFSQLTVVYSAEEEPGRAPAGVFSRSLTAWDIEVSWIAVPGSLSKGRIQGYEV
RYWKQNEKEQNARKLRTLGNQTSTKLSHLQGHTLYHLNIRAYNSAGTGPASTSVNVTTRK
PPPSQPPGNIIWNSSNSKIILNWDQVTAQEDESEVKGYRVLYRWNRPGGSSVIETNQTSV
ELSLPYDEDYIIEIRSVSEGGEGISSEPIRIPRISNAYAQGSGASTSNACTLSAISTLMI
SLTARSSL
Download sequence
Identical sequences Q6INB5
gi|148228227|ref|NP_001085050| gi|47940323|gb|AAH72368| NP_001085050.1.7800

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]