SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for gi|66912027|gb|AAH97587| from Xenopus laevis

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  gi|66912027|gb|AAH97587|
Domain Number 1 Region: 33-212
Classification Level Classification E-value
Superfamily MHC antigen-recognition domain 2.99e-65
Family MHC antigen-recognition domain 0.00000577
Further Details:      
 
Domain Number 2 Region: 221-305
Classification Level Classification E-value
Superfamily Immunoglobulin 5.05e-23
Family C1 set domains (antibody constant domain-like) 0.0015
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) gi|66912027|gb|AAH97587|
Sequence length 364
Comment LOC432122 protein [Xenopus laevis]
Sequence
PTRPVLPALYNNRMDLHLVPLLLTLWVSAVHSGSHSLRYYYLGVSDRAFGLPEFSTAGYV
DDIRIRRFKSDIGKEEPMVQWMKENEGPEYWELQTQILKGLEATFKHNVKVAMDRFNQTS
GTHSFQRMYGCELREDNSVRGYSQYGYDGREFIALDTDRWVYVHSVREAQLTEQKWNSPE
VNAPERYKNYMQNLCIEGLKKYLSYGQAELERRVHPHVRISDDQSDDATELRCQAYGFYP
KEIDVKWVKNGRDDVQSEAAKEILPNPDGSYQLRVSAEITPKEGDSYACHVEHSSLKEKL
IVVWPGPNKDGNNMGIIIAIAVVAVVVIAAVVGFVIYKKRNGKAYMKTASGETASNESAD
SVKA
Download sequence
Identical sequences Q4V826
gi|66912027|gb|AAH97587|

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]