SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for gi|71682397|gb|AAI00167| from Xenopus laevis

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  gi|71682397|gb|AAI00167|
Domain Number 1 Region: 780-974
Classification Level Classification E-value
Superfamily Fibronectin type III 3.08e-38
Family Fibronectin type III 0.0000399
Further Details:      
 
Domain Number 2 Region: 1072-1169
Classification Level Classification E-value
Superfamily Fibronectin type III 4.04e-25
Family Fibronectin type III 0.0014
Further Details:      
 
Domain Number 3 Region: 1188-1282
Classification Level Classification E-value
Superfamily Immunoglobulin 4.91e-23
Family I set domains 0.015
Further Details:      
 
Domain Number 4 Region: 673-788
Classification Level Classification E-value
Superfamily Immunoglobulin 8.55e-20
Family I set domains 0.0001
Further Details:      
 
Domain Number 5 Region: 991-1081
Classification Level Classification E-value
Superfamily Immunoglobulin 0.00000000000000154
Family I set domains 0.027
Further Details:      
 
Domain Number 6 Region: 387-474
Classification Level Classification E-value
Superfamily Immunoglobulin 0.00000000000000212
Family I set domains 0.0001
Further Details:      
 
Domain Number 7 Region: 472-547
Classification Level Classification E-value
Superfamily Immunoglobulin 0.00000000000000776
Family I set domains 0.0016
Further Details:      
 
Domain Number 8 Region: 164-266
Classification Level Classification E-value
Superfamily Immunoglobulin 0.00000000000000782
Family I set domains 0.0000155
Further Details:      
 
Domain Number 9 Region: 10-96
Classification Level Classification E-value
Superfamily Immunoglobulin 0.0000000000000282
Family I set domains 0.021
Further Details:      
 
Domain Number 10 Region: 562-633
Classification Level Classification E-value
Superfamily Immunoglobulin 0.000000000000132
Family I set domains 0.0083
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) gi|71682397|gb|AAI00167|
Sequence length 1284
Comment LOC398261 protein [Xenopus laevis]
Sequence
MPEPVKKSAFTKKPKSEEVSVGGTVTFVAETEKPGLKVKWQRNNVDITANERFAIKSEGK
QHSLTISNAITEDEVVYAVIAGTSKVKFELKVKEQEKTEESPAPVSNPDPAPAPAAPEAS
EAPAPPASDGSAPPPTEAAEAKPPESSEATATQPEPPKDEIGLFLERPQDGEITVGTNIK
FTARIAGANLIKKPVVKWFKGKWMDLTSKVGKHLQLHESYDRNTKIYTFEIQIIGAKTTY
AGGYRCEVSSKDKFDSCNFNLAVHEAASSGEVDIRAAFRRTSLVGAAKRRVSIAFSGDGT
EEAGELDFSALLKKRDSFLRSVNRNEPKQGTEPDVDVWEILKKAPPSEYEKIAFQYGITD
LRGLLKRLKKMKKEEKKSEAFLKKMDPAYQIDKGQKMKLVVEVANPDAEVKWLKNGQEIR
VSGSKYIFESIGNKRILTINNCSLADDAAYTCVIGEEKCFTELFVREPPIQILHPLEDQM
VMVGERVEFMCEVSEEGAQVKWEKDGVELTREETFKYRFKKDGKKHYLIINETTVEDGGH
YKVKTNGGDSLAELMVQEKQLEVLQDVADLTVRAKEQAVFKCEVSDETVTGIWVKNGKEV
IANNRIKITHIGRVHKLTIDDVVPQDEGDYSFIPNGFAFSLSAKLHFMEVKIDFVPRQEP
PKIKLDCMSQCADTIIVVAGNKLRLDVPISGDPAPTVVWMKGDKVIEQIKVRTETESQHD
LYRDVDLISEVDGRVHVETHPDHCVFTIEGAEKSDEGAYTVVVKNEAGEDKANINVKVIE
VPDPPEAPRISNIGEDFCTVQWDPPKYDGGQPILGYILERKKKKSYRWMRLNYDLVKELT
YESKRMIEGVVYEMRIYAVNSIGMSIPSQHSQPFMPIAPTSEPTMLVVDDVSDTSISLKW
RPPERIGAGGLDGYTVEYCKEGSTEWVPALLGLTERTSVMIRDLPTGERLAFRVRAINLA
GPSEPCTMKEPVTIREIMQRPKIWLPRYLRQKLIKKVGETVNIVIPFQGKPRPVVTWLKD
GQPVDPKQIGIRNSEADSILFIRKAERDHSGEYKVQIQIENCEDSATIHIQIVDKPSAPQ
NLKLVEIWGFNVALEWVPPKDDGNTEITGYTVQKADKKTMEWFTVFEHYRRTHCVVSDLI
MGNEYFFRVFSENMCGLSENPCTSKNSAYIQKTGTAYKPPSYKDHEFEEAPKFTHPLNDR
SVIAGYNATLSCALRGIPKPKITWYKNKMDLSMEARYRSFSKQGVLTLELRKPSPFDGGV
YTCKAVNEHGVAETECRLEVRVPQ
Download sequence
Identical sequences Q498L6
gi|71682397|gb|AAI00167|

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]