SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for gi|148224184|ref|NP_001080444| from Xenopus laevis

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  gi|148224184|ref|NP_001080444|
Domain Number 1 Region: 159-268
Classification Level Classification E-value
Superfamily Thioredoxin-like 3.83e-36
Family PDI-like 0.0092
Further Details:      
 
Domain Number 2 Region: 275-398
Classification Level Classification E-value
Superfamily Thioredoxin-like 9.25e-33
Family PDI-like 0.005
Further Details:      
 
Domain Number 3 Region: 36-138
Classification Level Classification E-value
Superfamily Thioredoxin-like 2.16e-28
Family PDI-like 0.0077
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) gi|148224184|ref|NP_001080444|
Sequence length 403
Comment thioredoxin domain containing 5 [Xenopus laevis]
Sequence
MLRCPSAVLLCALLLRVSGEPWEEGADDDPHKKNLYSADMFDHAVKQEPHFIMFFAPWCG
HCQRLQSTWNELGDKYNTMPNTPAYIAKVDCTTDMPTCTNHGVRGYPTLKLFKPGQEAVK
YQGPRDLQSLENWMLQTLNAEAEKPKVEEKAEDPAKVPELKQGLYELTGANFKEHVAEGY
HFIKFFAPWCGHCKSLAPAWEQLAASFQDSKSVKIAKVDCTQHNELCSEYQVRGYPTLLW
FRNGEKVDQYKGKRDLDTMKEYAESQLKPAEEKKEEEQKKEATPPQVQEPVESKVLSLSE
SNFDQTVATGVSFIKFYAPWCGHCKNLAPIWEDLAKKEFSGMSDVKIAKVDCTAERSVCS
RFSVRGYPSLLLFRAGEKIGEHEGARDLETLQNYVLRHSRDEL
Download sequence
Identical sequences Q7ZX44
gi|148224184|ref|NP_001080444| gi|28280043|gb|AAH45245| NP_001080444.1.7800

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]