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Domain assignment for gi|189217480|ref|NP_001121212| from Xenopus laevis

Domain architecture


Domain assignment details

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Strong hits

Sequence:  gi|189217480|ref|NP_001121212|
Domain Number 1 Region: 470-527
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 7.32e-22
Family Classic zinc finger, C2H2 0.0097
Further Details:      
 
Domain Number 2 Region: 386-443
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 8.03e-21
Family Classic zinc finger, C2H2 0.0062
Further Details:      
 
Domain Number 3 Region: 540-592
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 2.54e-17
Family Classic zinc finger, C2H2 0.015
Further Details:      
 
Domain Number 4 Region: 302-351
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 3.92e-16
Family Classic zinc finger, C2H2 0.013
Further Details:      
 
Domain Number 5 Region: 18-67
Classification Level Classification E-value
Superfamily KRAB domain (Kruppel-associated box) 0.00000000000000106
Family KRAB domain (Kruppel-associated box) 0.0023
Further Details:      
 
Domain Number 6 Region: 223-273
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 0.000000000000783
Family Classic zinc finger, C2H2 0.011
Further Details:      
 
Domain Number 7 Region: 433-464
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 0.000000000787
Family Classic zinc finger, C2H2 0.0088
Further Details:      
 
Domain Number 8 Region: 193-232
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 0.0000000258
Family Classic zinc finger, C2H2 0.057
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) gi|189217480|ref|NP_001121212|
Sequence length 602
Comment hypothetical protein LOC100158283 [Xenopus laevis]
Sequence
MVGLRQGLMDPPINSLTQVAFEDVAVYFSELEWALLKDCQKDLYKTVMRDNYEVVASLGF
PVLRSKALGRMRHGVTVELEGTEEIDIGDSAQNMKDIMKCLNKCLSPLQICTEFSSGCRS
QAVSDPSAKSLGNVKKEEFQTFGALGSLPLRVPNLLANTNSRCDRVALKQGQNGKALSYQ
PDAGAHDAEGFHTPFQCSKCKKTFTNPYDLQSHANVHIREIRYTCRDCGRGFSRSDFFKA
HRHMHMGEKPFKCSECKKCFSAVSILKKHLRSHQPKMSRRAKKMKKKSKQNVPDFLSDLD
YEKKHTCTVCQKTFSKSYNLKVHERIHTGEKPYKCPKCDKCFSQNARLRVHRTTHAEWAH
EAMWVRKRKPSVPTEKLHKCNVCEKSFSKSYSLKVHLRTHTGEKPYTCDECHKSFSKNNL
LTVHKRIHSGERPYQCNDCLKSFSVISHLRVHKRTHTGERPYKCTECIKSFSDYSSMVRH
QRIHSGAKPYQCNVCQKTFREKSHVTVHQRTHTGERPYKCAECSKTFSDCSSFVEHRRHH
TGARPYKCELCHKSFTKAYTLKIHHRVHTGERPYQCDQCPRSFSINYHLKVHEKTHWNNQ
KL
Download sequence
Identical sequences B1H1R1
gi|169642128|gb|AAI60704| gi|189217480|ref|NP_001121212| NP_001121212.1.7800

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