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Domain assignment for gi|453460|gb|CAA50014| from Xenopus laevis

Domain architecture


Domain assignment details

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Strong hits

Sequence:  gi|453460|gb|CAA50014|
Domain Number 1 Region: 307-363
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 3.89e-21
Family Classic zinc finger, C2H2 0.0068
Further Details:      
 
Domain Number 2 Region: 250-307
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 4.21e-21
Family Classic zinc finger, C2H2 0.012
Further Details:      
 
Domain Number 3 Region: 348-400
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 1.45e-19
Family Classic zinc finger, C2H2 0.0045
Further Details:      
 
Domain Number 4 Region: 210-260
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 6.9e-18
Family Classic zinc finger, C2H2 0.0091
Further Details:      
 
Domain Number 5 Region: 418-463
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 0.000000000000496
Family Classic zinc finger, C2H2 0.0073
Further Details:      
 
Weak hits

Sequence:  gi|453460|gb|CAA50014|
Domain Number - Region: 157-186
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 0.00138
Family Classic zinc finger, C2H2 0.034
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) gi|453460|gb|CAA50014|
Sequence length 478
Comment zinc finger protein [Xenopus laevis]
Sequence
MLQIKTEKEELDCGDDQNPKESSAVPLTNGASPLAESEILEIKIKEEEPDYEYYLPTIKR
EMDPVPGAASPLAESEILQIKIKEEEPESEDDGNSAARSAVTFRDWGSADTANTPAINTV
LSRGNGLFVVNQEKRVATNSSCQSDTGHVDCSVGSEPSGFICCKCGDSFAHHSDLHTHLY
ACAGHNITSSFTNASEEGQHSHKNGGVLPREKPFKCTVCGKCFTLRNSLRLHHRIHTGEK
PFTCTECGKSFSQRCSLQLHSRTHTGHNPYVCTECGKRFSSNTGLRAHMRTHTGVKPYAC
TECGKFFSDSSTLRRHQNTHKAEKPFTCTECGKGFTLKDNLHRHHRIHTGEKPFTCAECG
KSYSQSNNLIKHQMIHTGVKPFSCSECGKSFAFKEGLRNHQAIHMRRNHSAAQNVTRMFS
LMSTLHKHQIVHTGEKPFTCTECGKSFSLNSSFHYHKKSHEGQTKKNKRELKWGQKGT
Download sequence
Identical sequences Q788Q7
gi|148235433|ref|NP_001079295| gi|453460|gb|CAA50014|

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