SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for ENSXETP00000005555 from Xenopus tropicalis 76_4.2

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  ENSXETP00000005555
Domain Number 1 Region: 201-280
Classification Level Classification E-value
Superfamily GAS2 domain-like 1.44e-29
Family GAS2 domain 0.00000513
Further Details:      
 
Domain Number 2 Region: 25-179
Classification Level Classification E-value
Superfamily Calponin-homology domain, CH-domain 1.78e-29
Family Calponin-homology domain, CH-domain 0.0027
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) Protein: ENSXETP00000005555   Gene: ENSXETG00000002603   Transcript: ENSXETT00000005555
Sequence length 313
Comment pep:known scaffold:JGI_4.2:GL173874.1:9075:76112:-1 gene:ENSXETG00000002603 transcript:ENSXETT00000005555 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence
PVKENQRSGQGIIDMHQYSQWLAIRHEANLLPMKEDLALWLTSFLGKEITAETFMEKLDN
GALLCQLAETLQDKFRENHTDANRKLDKSLPTKKIPYRANAPSGSFFARDNTANFLAWCR
NIGVGETCLFESEGLVLHKQPREVCLCLLELGRIAARFGVEPPGLIKLEKEIEQEEILST
PTPSPSPSPTKSPGKKSTGKLLDDAVQHISEDPPCKCPNKFCVERLSQGRYKVGEKILFI
RMLHNKHVMVRVGGGWETFAGYLLKHDPCRMLQISRVDGKTSPVQNKSPTIKDMSPDTYL
VVSAHYKSKKEIK
Download sequence
Identical sequences F6XAF5
ENSXETP00000005555 ENSXETP00000005555

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]