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  Home > Genomes > Xenopus tropicalis 76_4.2 > ENSXETP00000023596

Domain assignment for ENSXETP00000023596 from Xenopus tropicalis 76_4.2

Domain architecture

Domain assignment details

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Strong hits

Sequence:  ENSXETP00000023596
Domain Number 1 Region: 1160-1217
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 9.12e-20
Family Classic zinc finger, C2H2 0.01
Further Details:      
 
Domain Number 2 Region: 1704-1763
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 7.6e-19
Family Classic zinc finger, C2H2 0.012
Further Details:      
 
Domain Number 3 Region: 959-1015
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 1.87e-18
Family Classic zinc finger, C2H2 0.01
Further Details:      
 
Domain Number 4 Region: 208-260
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 3.98e-18
Family Classic zinc finger, C2H2 0.012
Further Details:      
 
Domain Number 5 Region: 502-559
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 2.16e-17
Family Classic zinc finger, C2H2 0.015
Further Details:      
 
Domain Number 6 Region: 653-709
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 7.81e-17
Family Classic zinc finger, C2H2 0.01
Further Details:      
 
Domain Number 7 Region: 1202-1254
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 0.0000000000000783
Family Classic zinc finger, C2H2 0.013
Further Details:      
 
Domain Number 8 Region: 464-516
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 0.000000000000183
Family Classic zinc finger, C2H2 0.02
Further Details:      
 
Domain Number 9 Region: 1000-1052
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 0.0000000000008
Family Classic zinc finger, C2H2 0.011
Further Details:      
 
Domain Number 10 Region: 699-750
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 0.00000000000309
Family Classic zinc finger, C2H2 0.0083
Further Details:      
 
Domain Number 11 Region: 1664-1724
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 0.000000000117
Family Classic zinc finger, C2H2 0.03
Further Details:      
 
Domain Number 12 Region: 185-217
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 0.000000000182
Family Classic zinc finger, C2H2 0.011
Further Details:      
 
Domain Number 13 Region: 83-132
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 0.00000000112
Family Classic zinc finger, C2H2 0.037
Further Details:      
 
Domain Number 14 Region: 1753-1785
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 0.0000000512
Family Classic zinc finger, C2H2 0.0056
Further Details:      
 
Domain Number 15 Region: 25-77
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 0.0000000638
Family Classic zinc finger, C2H2 0.026
Further Details:      
 
Domain Number 16 Region: 119-167
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 0.0000232
Family Classic zinc finger, C2H2 0.041
Further Details:      
 
Weak hits

Sequence:  ENSXETP00000023596
Domain Number - Region: 549-586
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 0.0195
Family Classic zinc finger, C2H2 0.015
Further Details:      
 
Domain Number - Region: 1639-1673
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 0.0789
Family Classic zinc finger, C2H2 0.047
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) Protein: ENSXETP00000023596   Gene: ENSXETG00000010789   Transcript: ENSXETT00000023596
Sequence length 1833
Comment pep:known scaffold:JGI_4.2:GL173705.1:69814:136926:-1 gene:ENSXETG00000010789 transcript:ENSXETT00000023596 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence 
MFETDTDGVLTPNDENNSYAYHGPTHKCDICLLSFPKETQYQRHMRDHERNDKAHRCDQC
PMSFNIDFNLTLHKATHNVDDPTCPACRKKFSRVASLKAHIMLHEKEETLICSECGDEFT
LPNNLSLHMEEHRQELVGSKTYSCKSCKKTFDSTPQLKEHMKTHFKIRVANTRSYNRNID
RSGFSYSCPHCGKTFQKPSQLTRHIRIHTGERPFKCNICGKAFNQKGALATHMVKHTGEK
PHACAFCPAAFSQKGNLQSHIQRVHSEVKNGATYHCTDCSCIFKSLGSLNTHISKMHVVG
SQTTPAPTGGTSTVTTVTVFQAVPAQTDSTDCSASEQQGPQQPAVTDVIQQLLELSEPVD
NPQNSQSEQQLNISVGINRDILQQALENSGLSSIPVAALPSDTSQAKATVQEIECLSTQQ
MDCNDQEHEVEHEEQDKADKTEKRIIKKKSAFSAGSVREESGIRWHICTYCNKEFKKPSD
LVRHIRIHTHEKPFKCLQCFRAFAVKSTLTAHIKTHSGIKAFKCDFCMKCFSTSGSLKVH
IRLHTGVRPFACPHCDKKFRTSGHRKTHIASHFKQCELRKLRQQRKPGKVRVGKSNVPVS
EIPLQEPILITDLDKGLIQPIPRNSQFFQNYFINSYTHEVDRPYKCYYCHRAYKKSCHLK
QHIRSHTGEKPFKCTQCGRGFASSGVLKAHIRTHTGLRDYKCLVCNGAFTTGGSLRRHMC
IHNDLRPYMCPYCQKTFKTSLNCKKHMKTHRYEVASQLHQHQPAVSEETPADQIHVSNQI
QVEIAGDGLHQSSSVARQPEAILQLSPQPVLDTVSPALGQTLTEQNLETDEDRFVTSQHA
LQENINQYETTELPTQSYDQQGLSQGFTVTDSFSQQAQFSAVQQLQDSSTLESQALSTSY
QQPTLLEVPTADTINVTARLIQEGTHEEIELQTQSAPFLESTEDRSRRAYRCDYCNKGFK
KSSHLKQHIRSHTGEKPYKCTMCGRGFVSSGVLKSHEKTHTGVKAYSCTICNAAFTTNGS
LTRHMSTHISMKPYKCPFCDETFRTTVHCKKHMKKHQNIGPALVPDTDETATEEVLGLET
EDESAERSASRKSRHGVITFTEEETAELAKIRPREGATISEKVLVQSAAEKDRISEIKDK
QAEMETEPKFANCCSFCPKSFKKPSDLIRHIRIHTGEKPFKCDECGKSFTVKSTLDSHVK
THAGQKLFSCHVCSNSFSTKGSLKVHMRLHTGAKPFKCPHCDMRFRTSGRRKTHIQCHYK
ADAKRIRKPVVVAPPSSATTTTTESLQPINLLNTSATDPSVFITNSSVLSSQFDQSLQGL
VGQAILPASVSAGGDLTVSLSDGSLATLEGIQLQLAANLVGQNVQISGIDATSINNITLQ
IDPSLLQQTLQHTSIIPQQIPGDPNTAQPTSSLQTTDQPANVVLQPIASLSLQPPTSSSS
SLTIGPMAEQESVLSSSSTSGQDLSQVMASQGLVPPSNGQHEITLTINNSSLSHVLAHAT
GSTPTTSTGSPQEITLTISELTTSSGSLPCTTSISQAPVSTQNLVMSSGMGGDGSVTLTL
ADTQSMLSGGLDAVTLNITSQAQQFPGILSDSSLAGPNGAGPQQVILVSHATQPSSELSY
QVTGDAQIEKNSQADKEGRLHQCFECNHCFPSAAILAEHNKEAHGKERIHVCHLCNKAFK
RASHLKEHMQTHQPGPSRSSQMPKLFKCDTCDKAFAKPSQLERHSRIHTGERPFQCTLCE
KAFNQKSALQVHMKKHTGEKPYKCDYCSMTFTQKCNMKLHMKRTHAYPDLIEEVSLHPEE
EEGEEDIGQALDLEEVVQESSGEWQCGITNVFR
Download sequence
Identical sequences F6QDF7
ENSXETP00000023596 ENSXETP00000023596

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]
Please cite: Gough, J., Karplus, K., Hughey, R. and Chothia, C. (2001). "Assignment of Homology to Genome Sequences using a Library of Hidden Markov Models that Represent all Proteins of Known Structure." J. Mol. Biol., 313(4), 903-919.

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© Copyright 2013 The SUPERFAMILY authors and Julian Gough.