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Domain assignment for ENSXETP00000038018 from Xenopus tropicalis 76_4.2

Domain architecture


Domain assignment details

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Strong hits

Sequence:  ENSXETP00000038018
Domain Number 1 Region: 195-233
Classification Level Classification E-value
Superfamily LDL receptor-like module 0.0000000314
Family LDL receptor-like module 0.0017
Further Details:      
 
Weak hits

Sequence:  ENSXETP00000038018
Domain Number - Region: 154-183
Classification Level Classification E-value
Superfamily PKD domain 0.031
Family PKD domain 0.0098
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) Protein: ENSXETP00000038018   Gene: ENSXETG00000017503   Transcript: ENSXETT00000038018
Sequence length 383
Comment pep:known scaffold:JGI_4.2:GL173379.1:453687:469635:-1 gene:ENSXETG00000017503 transcript:ENSXETT00000038018 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence
FNQMEEHIIRTKDSLEAGATFLKAPAEVSSWKQCLEVCCAETRCSAAVVEHSGRGLSCFL
FDCTLRGRSVCQFSPHRDYSSYTLTGRNATSGWALRSPLHLLTKQHDPIPGYILQKRKVK
KNYSQTIYQNTLLYGYILRIHQQVPQPGTLKLSNLQEGVYNLQLTVTDTSGQKSSDNVSV
SVLVKPYTTVNCTGTCSRYQFICDDGCCIDITLACDRVIQCPDGSDEAFCQNCNTDKQTG
TEIVRTAERKMSLSLDKGKNYSLTQELHHNMLIQGLPHLIHPNVSVSRGPMIEQSSPLDT
DPSESDKDDEGRDSFLNHKDIPQGSGHPVPETGAILPLALGLAITALLLLMVVCRLQLVK
QKLKKARPLTSEESDYLINGMYL
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Identical sequences F7BWB9
ENSXETP00000038018 ENSXETP00000055091

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