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Domain assignment for ENSXETP00000057309 from Xenopus tropicalis 76_4.2

Domain architecture


Domain assignment details

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Strong hits

Sequence:  ENSXETP00000057309
Domain Number 1 Region: 234-426
Classification Level Classification E-value
Superfamily LigT-like 0.00000000000227
Family 2'-5' RNA ligase LigT 0.018
Further Details:      
 
Weak hits

Sequence:  ENSXETP00000057309
Domain Number - Region: 42-62
Classification Level Classification E-value
Superfamily CCCH zinc finger 0.0012
Family CCCH zinc finger 0.0054
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) Protein: ENSXETP00000057309   Gene: ENSXETG00000027476   Transcript: ENSXETT00000057309
Sequence length 427
Comment pep:known scaffold:JGI_4.2:GL173017.1:995267:996550:-1 gene:ENSXETG00000027476 transcript:ENSXETT00000057309 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence
NKGSGASQDVSTGDTNTEVNPGPSGNEMDTLINSCGAAAECVPCQFFLTGRCRFGERCRN
VHPGSLLSFQPESKPKPKGESEPKGKKPPMKTAADVISRIQWDPKLPKEDFLIGYLDRFL
GIIEKPYSAFCWEDLASVGHDVLAIPKHRIQYFKYRDLVVWDKTSRTDNVFGSTGSALTI
LDIIERYEMLAPKEPVATALEEPTLADADVEVGSEYGEHSNEVDESDGKVRPSHFVAVRI
SSEEVRSAVKEVQNVLLGNNPDLAEFCVPLPSLHLTLCLLYLESAEDIERALLTLQELKH
EMQRTLPPSLILSFEGVRDFHSRVLYLAPSAFPALEKFAHSLQKSFQSKGLRVIDPPRSS
HFHVTIAKIPMKVLRKQPNLAFVPQVYSNTPVTHFGAQQVDSLSFCYAGSARRTDGFYTT
LLELNLY
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Identical sequences F6WF50
ENSXETP00000057309 8364.ENSXETP00000057309 ENSXETP00000057309

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