SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for ENSXETP00000011580 from Xenopus tropicalis 76_4.2

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  ENSXETP00000011580
Domain Number 1 Region: 327-589
Classification Level Classification E-value
Superfamily Nuclear receptor ligand-binding domain 2.1e-71
Family Nuclear receptor ligand-binding domain 0.000000000202
Further Details:      
 
Domain Number 2 Region: 254-332
Classification Level Classification E-value
Superfamily Glucocorticoid receptor-like (DNA-binding domain) 9.58e-28
Family Nuclear receptor 0.000015
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) Protein: ENSXETP00000011580   Gene: ENSXETG00000031753   Transcript: ENSXETT00000011580
Sequence length 591
Comment pep:known scaffold:JGI_4.2:GL172687.1:3147279:3156838:1 gene:ENSXETG00000031753 transcript:ENSXETT00000011580 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence
MPCVQAQYGSSPQGASPASQSYTYHSSGEYSSDFLTPEFVKFSMDLTNTEITATTSLPSF
STFMDNYNTSYDVKPPCLYQMPLSGQQSSVKVEDIQMHGYQQHGHLPPQSEEMMSHSGSV
YYKPSSPPTSSTPGFPVQHSPMWDNHGSLHSFNQNYVATRGGHVPRLSLFSFKQSPPGTP
VSSCQMRFDGHHVSMNPETSGAHHVIDGQTFAVPNPIRKQASMGFPGLQLGHASQLIDSQ
VPSPPSRGSPSNEGLCAVCGDNAACQHYGVRTCEGCKGFFKRTVQKNAKYVCLANKNCPV
DKRRRNRCQYCRFQKCLVVGMVKEVVRTDSLKGRRGRLPSKPKSPQEPSPPSPPVSLISA
LVRAHVDSNPAVSSLDYSRFQANPEYQMNGDDTQHIQQFYDLLTGSMEIIRGWAEKIPGF
SELHKQDQDLLFESAFLELFVLRLAYRSNPAEGKLIFCNGVVLNRLQCVRGFGEWIDSIV
DFSSNLHSMNIDISAFSCIAALAVITERHGLKEPKRVEELQNKIVNCLKDHVTFNNGGLN
RPNYLSKLLGKLPELRTLCTQGLQRIFYLKLEDLVPPPAIIDKLFLDTLPF
Download sequence
Identical sequences A4IIG7
ENSXETP00000011580 ENSXETP00000011580 gi|134024482|gb|AAI36010| gi|154147678|ref|NP_001093678| gi|172044159|gb|A4IIG7| NP_001093678.1.99540

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]