SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for ENSXETP00000039422 from Xenopus tropicalis 76_4.2

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  ENSXETP00000039422
Domain Number 1 Region: 353-476
Classification Level Classification E-value
Superfamily EF-hand 2.53e-42
Family EF-hand modules in multidomain proteins 0.0000141
Further Details:      
 
Domain Number 2 Region: 479-574
Classification Level Classification E-value
Superfamily EF-hand 2.63e-33
Family EF-hand modules in multidomain proteins 0.0000314
Further Details:      
 
Domain Number 3 Region: 555-641
Classification Level Classification E-value
Superfamily RING/U-box 2.12e-17
Family ZZ domain 0.014
Further Details:      
 
Domain Number 4 Region: 192-312
Classification Level Classification E-value
Superfamily Spectrin repeat 0.000000000000158
Family Spectrin repeat 0.0062
Further Details:      
 
Domain Number 5 Region: 29-146
Classification Level Classification E-value
Superfamily Spectrin repeat 0.0000000000017
Family Spectrin repeat 0.006
Further Details:      
 
Domain Number 6 Region: 315-352
Classification Level Classification E-value
Superfamily WW domain 0.0000000000102
Family WW domain 0.00021
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) Protein: ENSXETP00000039422   Gene: ENSXETG00000018175   Transcript: ENSXETT00000039422
Sequence length 930
Comment pep:known scaffold:JGI_4.2:GL173251.1:474482:504533:-1 gene:ENSXETG00000018175 transcript:ENSXETT00000039422 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence
MHPMVMQDGAHCLLTDQWHHSSTATSDSTNQLSQVPDSEESSASQIQPEMNLCWNEIKKK
SQSLRARLEAFSDPTLKLHPPLQEIIDWLGQKDEELSAQLPLRGDLSSVQQAKDKHVTFM
EEVKSRGPYIYSVLESAQTFLTQHPFSDEEEDATQGKDSSPRSKAETLSRLLWKQASVAS
ELWDRLTARSLDQHRHLERTLEQIQELGISMKEAGDSIGQGESVQASWEPIGDLFIDSLP
DHIQTTKLFKEELSPIKDMVKLANDLAHQLALCDVHLSMENARELENINSRWKQLQTSVG
ERLRQLQDAHRDFGPESQHFLSSSVQVPWERAISPNKVPYYINHQAQTTCWDHPKMTELY
QALGDLNNIKFSAYRTAMKLRRVQKALRLDLVTLPLLTQIFTCDTLQSPERNLDVLDVIR
CLSSLYERLEEERGLLVNVPLCVDLTLNWLLNVFDGARNGRIRVLSFKAGIVSLCDCDVK
GKLQYLFSQVASPGNTCDQRQLGLLLHEAIQIPRQLGEVAAFGGSNVEPSVRSCFRFGNG
TAHLELAQFLEWGCLEPQSMVWLPVLHRVTLAETVKHQAKCSVCKQCPMKGFRYRSLKQF
GVDICQSCFLTGQAGKVNKLHYPIMEYYTPTTSGEKMRDFATTLKNKFRTRQYFSRHPQR
GYLPVQSVLEAEVADTPASSPMLPHADTHSRIEHFASRLAEMESQNCSFFTDSLSPDDSL
DEDQYLLRHSSPITDRDPSNTPQIPGNLNPEEEQGELEKILAHLEHENRILQGELKRLKW
QHAEAGEVSALGEVSPDVGGNGVGEAQSEELLSEARILRHHKNRLETRMQILEDHNKQLE
SQLRRLRELLLQPNTDEGKPSSSSSSPDSQSKCPAEGNAGTPDTEAADDVESRTREVGLC
LEDIMEKLRNAFPNTTDSDIAHVKSHTLPL
Download sequence
Identical sequences A4QNP9
ENSXETP00000039422 NP_001096188.1.99540 XP_012823312.1.99540 gi|140833082|gb|AAI36035| gi|156717292|ref|NP_001096188| ENSXETP00000039422

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]