SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for ENSXETP00000040687 from Xenopus tropicalis 76_4.2

Domain architecture


Domain assignment details

(
show help)

No Significant Hits.

Weak hits

Sequence:  ENSXETP00000040687
Domain Number - Region: 75-117
Classification Level Classification E-value
Superfamily LysM domain 0.000471
Family LysM domain 0.0083
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) Protein: ENSXETP00000040687   Gene: ENSXETG00000018786   Transcript: ENSXETT00000040687
Sequence length 292
Comment pep:known scaffold:JGI_4.2:GL173099.1:742504:744732:1 gene:ENSXETG00000018786 transcript:ENSXETT00000040687 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence
MRLREGRTHSFQPPSSVHSSLGSHVYTFSNGNAEADSSSEEEFDVTELRARGGEQQRVNG
SREKVGDVILLERAITEDDNLNKLALQYGCKVADIKRVNNLITDQDIYALKTIKIPVKVH
GLLTERGDELNAPQHTPGNASALPEPDQKSLPSPGSGDFTVYFKEIDQNIEAAAQTHDLF
NESFALDSPHHLSTHIQGQKQHSSGADWGLRWWNAVVIMLLVGIVLPVFYIVYFKTQGDS
EDIFSIEGRTNASASLSPHTNTVQSLEQMTQRTSGFSPSILQGSHKLLNPGG
Download sequence
Identical sequences F7B869
ENSXETP00000040687 XP_002939311.1.99540 XP_012815036.1.99540 8364.ENSXETP00000040687 gi|301619881|gb|XP_002939311| ENSXETP00000040687

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]