SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for ENSPTRP00000019621 from Pan troglodytes 76_2.1.4

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  ENSPTRP00000019621
Domain Number 1 Region: 662-719
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 2.49e-26
Family Classic zinc finger, C2H2 0.0038
Further Details:      
 
Domain Number 2 Region: 466-523
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 1.14e-25
Family Classic zinc finger, C2H2 0.0062
Further Details:      
 
Domain Number 3 Region: 522-579
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 1.95e-25
Family Classic zinc finger, C2H2 0.0093
Further Details:      
 
Domain Number 4 Region: 298-355
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 7.45e-25
Family Classic zinc finger, C2H2 0.005
Further Details:      
 
Domain Number 5 Region: 354-411
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 9.1e-25
Family Classic zinc finger, C2H2 0.008
Further Details:      
 
Domain Number 6 Region: 410-467
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 9.28e-25
Family Classic zinc finger, C2H2 0.0049
Further Details:      
 
Domain Number 7 Region: 718-775
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 2.03e-24
Family Classic zinc finger, C2H2 0.0069
Further Details:      
 
Domain Number 8 Region: 606-663
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 6.46e-24
Family Classic zinc finger, C2H2 0.0057
Further Details:      
 
Domain Number 9 Region: 1-64
Classification Level Classification E-value
Superfamily KRAB domain (Kruppel-associated box) 1.7e-23
Family KRAB domain (Kruppel-associated box) 0.0011
Further Details:      
 
Domain Number 10 Region: 774-823
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 4.76e-16
Family Classic zinc finger, C2H2 0.0064
Further Details:      
 
Domain Number 11 Region: 261-312
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 5.34e-16
Family Classic zinc finger, C2H2 0.0089
Further Details:      
 
Domain Number 12 Region: 569-601
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 0.0000000000199
Family Classic zinc finger, C2H2 0.0054
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) Protein: ENSPTRP00000019621   Gene: ENSPTRG00000011418   Transcript: ENSPTRT00000021255
Sequence length 840
Comment pep:known_by_projection chromosome:CHIMP2.1.4:19:58045072:58058546:-1 gene:ENSPTRG00000011418 transcript:ENSPTRT00000021255 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence
MALTQGQVTFRDVAIEFSQEEWTCLDPAQRTLYRDVMLENYRNLASLAGISCFDLSIISM
LEQGKEPFTVESQVQIARNPDGWEWIKAVITALSSEFVMKDLPHKGKSNTGEVFQTVMLE
RQESQDIEGCSFREVQKNTHDLEYQCRDAEGNYKGVLLTQEGNLTHGRDEHDKRDARNKL
IKNQLGLSLQSHLPELQLFQYEGKIYECNQVEKSFNNNSSVSPPQQMPYNVKTHISKKYL
KDFISSLLLTQGQKANNWGSPYKSNGCGMVFPQNSHLASHQRSHTKEKPYKCYECGKAFR
TRSNLTTHQVIHTGEKRYKCNECGKVFSRNSQLSQHQKIHTGEKPYKCNECGKVFTQNSH
LVRHRGIHTGEKPYKCNECGKAFRARSSLAIHQATHSGEKPYKCNECGKVFTQNSHLTNH
WRIHTGEKPYKCNECGKAFGVRSSLAIHLVIHTGEKPYKCHECGKVFRRNSHLARHQLIH
TGEKPYKCNECGKAFRAHSNLTTHQVIHTGEKPYKCNECGKVFTQNSHLANHQRIHTGVK
PYMCNECGKAFSVYSSLTTHQVIHTGEKPYKCNECGKVFTQNSHLARHRGIHTGEKPYKC
NECGKVFRHNSYLSRHQRIHTGEKPYKYNEYGKAFSEHSNLTTHQVIHTGEKPYKCNECG
KVFTQNSHLARHRRVHTGEKPYQCNECGKAFSQTSKLARHQRVHTGEKPYECNQCGKAFS
VRSSLTTHQAIHTGKKPYKCNECGKVFTQNSHLATHRGIHTGEKPYKCNECGKAFSQTSK
LARHQRVHTREKPYECGKPFSICSSLTTHQTIHTGGKPYKCNVWKVLKSEFKPCKPSQSS
Download sequence
Identical sequences ENSPTRP00000019621 ENSPTRP00000019621

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]