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Domain assignment for ENSPTRP00000019699 from Pan troglodytes 76_2.1.4

Domain architecture


Domain assignment details

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Strong hits

Sequence:  ENSPTRP00000019699
Domain Number 1 Region: 321-500
Classification Level Classification E-value
Superfamily LigT-like 5.41e-18
Family 2'-5' RNA ligase LigT 0.028
Further Details:      
 
Weak hits

Sequence:  ENSPTRP00000019699
Domain Number - Region: 45-64
Classification Level Classification E-value
Superfamily CCCH zinc finger 0.00549
Family CCCH zinc finger 0.0044
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) Protein: ENSPTRP00000019699   Gene: ENSPTRG00000011460   Transcript: ENSPTRT00000021341
Sequence length 501
Comment pep:known_by_projection chromosome:CHIMP2.1.4:19:59385030:59386535:-1 gene:ENSPTRG00000011460 transcript:ENSPTRT00000021341 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence
KGSRPPCGATWSARRACQFPAPMAAAREPELPQEAPATEPAPPPACRFFLEGRCRFGARC
RQPHPGAPAPPGREAQPEAGAKKPPLRTAADVIQRIRWDPRLDPADFSVGYVDRFLGVRE
EPFSAFCWDQPLAALGPGVLAVPQHRVRFFRFRGRLVWDRASRTDLVFGSGSAAGRGPTI
LDAPNTEGGHGAEDAEWTLAGTGQEAQAAPKRGSTRPLCTGHQEPGVEEPEELEAAQERA
LGTAADLGTLAPRGRLAGGTEEALKPTAATRTTLLGGKEAQALGVPGGSAETTEAEWGPA
AWPEDKRARLSVAAPCQPRPTHFVALMVTEPGLQAEVTKAQEYLVHVAPHCANFLVPSQN
LHLTLALLRLAGAGEEAAAIGALRRALLAPGLNAPPRLSFRKLVLLGPHVLCAPPSPTLE
SMAQVLSQRLEAEGLSTLQSPGQLHPHLTVAKVPHGSQVHLPKLEFTLSQEVGCQPLQTL
WLCRIGRTGGPFQPLAEIPLE
Download sequence
Identical sequences ENSPTRP00000019699 ENSPTRP00000019699

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