SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for ENSPTRP00000020219 from Pan troglodytes 76_2.1.4

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  ENSPTRP00000020219
Domain Number 1 Region: 17-317
Classification Level Classification E-value
Superfamily WD40 repeat-like 6.72e-35
Family WD40-repeat 0.0062
Further Details:      
 
Domain Number 2 Region: 249-307,334-564
Classification Level Classification E-value
Superfamily Tricorn protease domain 2 0.000000000000392
Family Tricorn protease domain 2 0.03
Further Details:      
 
Domain Number 3 Region: 1261-1374,1410-1431
Classification Level Classification E-value
Superfamily TPR-like 0.0000239
Family Tetratricopeptide repeat (TPR) 0.069
Further Details:      
 
Weak hits

Sequence:  ENSPTRP00000020219
Domain Number - Region: 914-1066
Classification Level Classification E-value
Superfamily ARM repeat 0.000132
Family PBS lyase HEAT-like repeat 0.083
Further Details:      
 
Domain Number - Region: 1031-1226
Classification Level Classification E-value
Superfamily HCP-like 0.00314
Family HCP-like 0.035
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) Protein: ENSPTRP00000020219   Gene: ENSPTRG00000011771   Transcript: ENSPTRT00000021916
Sequence length 1747
Comment pep:known_by_projection chromosome:CHIMP2.1.4:2A:27830639:27875739:-1 gene:ENSPTRG00000011771 transcript:ENSPTRT00000021916 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence
MHLKHLRTLLSPQDGAAKVTCMAWSQNNAKFAVCTVDRVVLLYDEHGERRDKFSTKPADM
KYGRKSYMVKGMAFSPDSTKIAIGQTDNIIYVYKIGEDWGDKKVICNKFIQTSAVTCLQW
PAEYIIVFGLAEGKVRLANTKTNKSSTIYGTESYVVSLTTNCSGKGILSGHADGTIVRYF
FDDEGSGESQGKLVNHPCPPYALAWATNSIVAAGCDRKIVAYGKEGHVLQTFDYSRDPQE
REFTTAVSSPGGQSVVLGSYDRLRVFNWIPQRSIWEEAKPKEITNLYTITALAWKRDGSR
LCVGTLCGGVEQFDCCLRRSIYKNKFELTYVGPSQVIVKNLSSGTRVVLKSHYGYEVEEV
KILGKERYLVAHTSETLLLGDLNTNRLSEIAWQGSGGNEKYFFENENVCMIFNAGELTLV
EYGNNDTLGSVRTEFMNPHLISVRINERCQRGTEDNKKLAYLIDIKTIAIVDLIGGYNIG
TVSHESRVDWLELNETGHKLLFRDRKLRLHLYDIESCSKTMILNFCSYVQWVPGSDVLVA
QNRNSLCVWYNIEAPERVTMFTIRGDVIGLERGGGKTEVMVMEGVTTVAYTLDEGLIEFG
TAVDDGNYIRATAFLETLEMTPETEAMWKTLINRHEQRQLPSHRCFSALGQVAKARFLHE
TNEIADQVSREYGGEGTDFYQVRARLAMLEKNYKLAEMIFLEQNAVEEAMGMYQELHRWD
ECIAVAEAKGHPALEKLRRSYYQWLMDTQQEERAGELQESQGDGLAAISLYLKAGLPAKA
ARLVLTREELLANTELVEHITAALIKGELYERAGDLFEKIHNPQKALECYRKGNAFMKAV
ELARLAFPVEVVKLEEAWGDHLVQQKQLDAAINHYIEARCSIKAIEAALGARQWKKAIYI
LDLQDRNTASKYYPLVAQHYASLQEYEIAEELYTKGDRTKDAIDMYTQAGRWEQAHKLAM
KCMRPEDVSVLYITQAQEMEKQGKYREAERLYVTVQEPDLAITMYKKHKLYDDMIRLVGK
HHPDLLSDTHLHLGKELEAEGRLQEAEYHYLEAQEWKATVNMYRASGLWEEAYRVARTQG
GANAHKHVAYLWAKSLGGEAAVRLLNKLGLLEAAVDHAADNCSFEFAFELSRLALKHKTP
EVHLKYAMFLEDEGKFEEAEAEFIRAGKPKEAVLMFVHNQDWEAAQRVAEAHDPDSVAEV
LVGQARGALEEKDFQKAEGLLLRAQRPGLALNYYKEAGLWSDALRICKDYVPSQLEALQE
EYEREATKKGARGVEGFVEQARHWEQAGEYSRAVDCYLKVRDSGNSGLAEKCWMKAAELS
IKFLPPQRNMEVVLAVGPQLIGIGKHSAAAELYLNLDLVKEAIDAFIEGEEWNKAKRVAK
ELDPRYEDYVDQHYKEFLKNQGKVDSLVGVDVIAALDLYVEQGQWDKCIETATKQNYKIL
HKYVALYATHLIREGSSAQALALYVQHGAPANPQNFNIYKRIFTDMVSSPGTNCAEAYHS
WADLRDVLFNLCENLVKSSEANSPVHEEFKTMLLIAHYYATRSAAQSVKQLETVAARLSV
SLLRHTQLLPVDKAFYEAGIAAKAVGWDNMAFIFLNRFLDLTDAIEEGTLDGLDHSDFQD
TDIPFEVPLPAKQHVPEAEREEVRDWVLTVSMDQRLEQVLPRDERGAYEASLVAASTGVR
ALPCLITGYPILRNKIEFKRPGKAANKDNWNKFLMAIKTSHSPVCQDVLKFISQWCGGLP
STSFSFQ
Download sequence
Identical sequences ENSPTRP00000020219 ENSPTRP00000020219

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]