SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for ENSPTRP00000035376 from Pan troglodytes 76_2.1.4

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  ENSPTRP00000035376
Domain Number 1 Region: 199-372,527-618,662-714
Classification Level Classification E-value
Superfamily WD40 repeat-like 1.23e-28
Family WD40-repeat 0.0031
Further Details:      
 
Weak hits

Sequence:  ENSPTRP00000035376
Domain Number - Region: 96-245
Classification Level Classification E-value
Superfamily YVTN repeat-like/Quinoprotein amine dehydrogenase 0.0018
Family YVTN repeat 0.07
Further Details:      
 
Domain Number - Region: 944-1101
Classification Level Classification E-value
Superfamily ARM repeat 0.00608
Family PBS lyase HEAT-like repeat 0.084
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) Protein: ENSPTRP00000035376   Gene: ENSPTRG00000020682   Transcript: ENSPTRT00000038262
Sequence length 1366
Comment pep:known_by_projection chromosome:CHIMP2.1.4:8:143002127:143011127:1 gene:ENSPTRG00000020682 transcript:ENSPTRT00000038262 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence
MEAEVWEAEGYNLVLDSDLYDADGYDVPDPGLLTEKNELTFTEPSQVLPFLTSSQQWQSL
TPRARARRLWLLLRTSLHEVVEKEKRAELRVARLTHGLEPLRRLEVAAGLRSVAQDPVGG
RFVVLDGAGRLHLHKEDGWAQETLLAPVGLTGLVTMLGPLGAVGRFVGWGPAGLAILRPN
LSLLWLSEQGVGRAPGWAPTCCLPVPDLRLLLVAEMNSSLALWQFRSGGRRLVLRGSPLH
PPPSPTGRLMRLAVAPVPPHHVLRCFAAYGSAVLTFDLHAWTLVDVRRDLHKTTISDLAY
CEEVEAMVTASRDSTVKVWEADWQIRMVFVGHTGPVTAMTVLPNTTLVLSASQDGTLRTW
DLQAAAQVGEVALGFWGQDKLSRRVGRLLAPVRPGWPVLSLCASSMQLWRVRELYSPLAQ
LPAKVLHVQVAPSLPAPAHQSLPTPLVCACGDGSVYLLSPREALWLLTRAGHLVRANAAR
CPMSVLHRVCPPPPPAPQPCCLHLYSHLTDLGGAFSSWEIVRQHWGELRCSSVACAWKNK
NRYLPVVGHTDGTLSVLEWLSSKTVFQTEAHSPGPVVAIASTWNSIVSSGGDLTVKMWRV
FPYAEESLSLLRTFSCCYPAVALCVLGRRVTAGFEDPDSATYGLVQFGLGDSPRLDHRPQ
DDPTDHITGLCCCPTLKLYACSSLDCTVRIWTAENRLLRLLQLNGAPQALAFCSNSGDLV
LALGSRLCLVSHRVYLPTSYLVKKMCQKAPDIPLLPKRWDKEPLSSLRGFFPATVQPHKH
CLRPICFPGYVPNSAVLQQMWLNAEPGASQDALWLWRPRPSQAQWQRKLLQCMGEKPGEE
GEEDEKEEEEEKEDEELDQALASLSPHSNQQLDSWELEDQSAVDWTQEPRRRSCKAARTH
PHPWHRHGSLLLDEHYGHLPKFLHFFIYQTWFKKLFPIFSLQAYPEAGTVEGLASLLVAL
LEKTTWVDRVHILQVLLRLLPNMSSDLQGQLQGLLIHLLNLDQPPSLQDQTQKKFVILAL
QLLLACSLESRDVVLELMSYFLYSPVHCRPELKKLLHGLGLRDPEGFLFKEMMTWVQGPD
LDSKAGLRTCCHQKLEDMIQQLQETPSQTSVVSGAPTRASVIPSGTSWSPSSIFGRLSQV
SEVPLMVVSPAEPHSLAPELQAQRTLAPTRSWGTPQLRLGVLSETLKSFCLEPEARLHPA
GPAQLPGEPPPLEETDWSHSQLLDLGPIDALNFFCEQLRAQQRSSLQEKAAHPHPPVPDT
VAPVPDMVVPPPQEHWCHPILRLQEAKPQRSARSAMRLRGPMLSRLCAGRTLDGRIRTLK
LPLPRVEPQPFPLDWPTPPRPLPPRLLQPALQRYFLPADADPDTYS
Download sequence
Identical sequences ENSPTRP00000035376 ENSPTRP00000035376

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]