SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for ENSPTRP00000036620 from Pan troglodytes 76_2.1.4

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  ENSPTRP00000036620
Domain Number 1 Region: 9-31,84-284
Classification Level Classification E-value
Superfamily Pseudouridine synthase 1.76e-52
Family Pseudouridine synthase II TruB 0.0024
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) Protein: ENSPTRP00000036620   Gene: ENSPTRG00000021423   Transcript: ENSPTRT00000039637
Sequence length 331
Comment pep:known chromosome:CHIMP2.1.4:9:127471767:127485350:-1 gene:ENSPTRG00000021423 transcript:ENSPTRT00000039637 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence
MGSAGLSRLHGLFAVYKPPGLKWKHLRDTVELQLLKGLNARKPPAPKQRVRFLLGPMEGS
EEKELTLTATSVPSFINHPLVCGPAFTHLKVGVGHRLDAQASGVLVLGVGHGCRLLTDMY
NAHLTKDYTVRGLLGKATDDFREDGRLVEKTTYDHVTREKLDRILAVIQGSHQKALVMYS
NLDLKTQEAYEMAVRGLIRPMNKSPMLITGIRCLYFAPPEFLLEVQCMHETQKELRKLVH
EIGLELKTTAVCSQVRRTRDGFFTLDSALLRTQWDLTNIQDAIRAAAPQVAAELEKSLSP
GLDTKQLPSPGWSWDSQGLSSTLGLQRGAGQ
Download sequence
Identical sequences H2QXY8
XP_001156841.1.37143 XP_016801853.1.37143 ENSPTRP00000036620 9598.ENSPTRP00000036620 ENSPTRP00000036620

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]