SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for ENSPTRP00000039949 from Pan troglodytes 76_2.1.4

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  ENSPTRP00000039949
Domain Number 1 Region: 294-351
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 3.55e-25
Family Classic zinc finger, C2H2 0.006
Further Details:      
 
Domain Number 2 Region: 462-519
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 1.27e-24
Family Classic zinc finger, C2H2 0.006
Further Details:      
 
Domain Number 3 Region: 406-463
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 2.29e-24
Family Classic zinc finger, C2H2 0.0035
Further Details:      
 
Domain Number 4 Region: 518-575
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 4.79e-24
Family Classic zinc finger, C2H2 0.0062
Further Details:      
 
Domain Number 5 Region: 574-631
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 8.46e-24
Family Classic zinc finger, C2H2 0.0031
Further Details:      
 
Domain Number 6 Region: 2-59
Classification Level Classification E-value
Superfamily KRAB domain (Kruppel-associated box) 1.96e-22
Family KRAB domain (Kruppel-associated box) 0.0015
Further Details:      
 
Domain Number 7 Region: 350-407
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 4e-22
Family Classic zinc finger, C2H2 0.0087
Further Details:      
 
Domain Number 8 Region: 621-672
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 1.57e-18
Family Classic zinc finger, C2H2 0.0065
Further Details:      
 
Domain Number 9 Region: 238-295
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 5.64e-17
Family Classic zinc finger, C2H2 0.011
Further Details:      
 
Domain Number 10 Region: 182-239
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 3.76e-16
Family Classic zinc finger, C2H2 0.022
Further Details:      
 
Domain Number 11 Region: 144-196
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 0.000000000261
Family Classic zinc finger, C2H2 0.012
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) Protein: ENSPTRP00000039949   Gene: ENSPTRG00000029066   Transcript: ENSPTRT00000051006
Sequence length 697
Comment pep:novel chromosome:CHIMP2.1.4:19:21891634:21923109:-1 gene:ENSPTRG00000029066 transcript:ENSPTRT00000051006 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence
MGPLTFMDVAIEFCLEEWQCLDTAQQNLYRNVMLENYRNLVFLGIAVSKPDLITCLEQEK
EPWEPVRRHEMVAKPPVMCSHFTQDFWPEQHIKDPFQKATLRRYKNCEHKNVHFKKDRKS
VDECKVHRGGYNGFNQCLPATQSKIFLFDKCVKAFHKFSNSNRHKISHTEKKLFKCKECG
KSFCMLPHLAQHKIIHTRVNFCKCEKCGKAFNCPSVITKHKRINTGEKPYTCEECGKVFN
WSSRLTTHKKIYTRYRLYKCEECGKAFNKSSILITHKIIRTGEKFYKCKECAKAFNQSSN
LTEHKKIHPGEKPYKCEECGKAFNWPSTLTKHKRIHTGEKPYTCEECGKAFNQFSNLTTH
KRIHTAEKFYKCTECGKAFSRSSNLTKHKKIHIEKKPYKCEECGKAFKWSSKLTEHKITH
TGEKPYKCEECGKAFNHFSILTKHKRIHTGEKPYKCEECGKAFTQSSNLTTHKKIHTGEK
FYKCEECGKAFTQSSNLTTHKKIHTGGKPYKCEECGKAFNQFSTLTKHKIIHTEEKPYKC
EECGKAFKWSSTLTKHKIIHTGEKPYKCEECGKAFKLSSTLSTHKIIHTGEKPYKCEKCG
KAFNRSSNLIEHKKIHTGEQPYKCEECGKAFNYSSHLNTHKRIHTKEQPYKCKECGKAFN
QYSNLTTHNKIHTGEKLYKPEDVTVILTTPQTFSNIK
Download sequence
Identical sequences ENSPTRP00000039949 ENSPTRP00000039949 9598.ENSPTRP00000039949

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]