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  Home > Genomes > Pan troglodytes 69_2.1.4 > ENSPTRP00000000536

Domain assignment for ENSPTRP00000000536 from Pan troglodytes 69_2.1.4

Domain architecture

Domain assignment details

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Strong hits

Sequence:  ENSPTRP00000000536
Domain Number 1 Region: 386-471
Classification Level Classification E-value
Superfamily Immunoglobulin 2.26e-21
Family I set domains 0.008
Further Details:      
 
Domain Number 2 Region: 1933-2021
Classification Level Classification E-value
Superfamily Immunoglobulin 1.41e-19
Family I set domains 0.017
Further Details:      
 
Domain Number 3 Region: 2028-2114
Classification Level Classification E-value
Superfamily Immunoglobulin 6.93e-19
Family I set domains 0.037
Further Details:      
 
Domain Number 4 Region: 1654-1749
Classification Level Classification E-value
Superfamily Immunoglobulin 3.57e-18
Family I set domains 0.015
Further Details:      
 
Domain Number 5 Region: 1750-1837
Classification Level Classification E-value
Superfamily Immunoglobulin 1.01e-16
Family I set domains 0.000023
Further Details:      
 
Domain Number 6 Region: 2511-2595
Classification Level Classification E-value
Superfamily Immunoglobulin 8.98e-16
Family I set domains 0.054
Further Details:      
 
Domain Number 7 Region: 2703-2788
Classification Level Classification E-value
Superfamily Immunoglobulin 0.00000000000000181
Family I set domains 0.072
Further Details:      
 
Domain Number 8 Region: 2321-2409
Classification Level Classification E-value
Superfamily Immunoglobulin 0.00000000000000278
Family I set domains 0.021
Further Details:      
 
Domain Number 9 Region: 2223-2304
Classification Level Classification E-value
Superfamily Immunoglobulin 0.00000000000000641
Family I set domains 0.043
Further Details:      
 
Domain Number 10 Region: 2605-2691
Classification Level Classification E-value
Superfamily Immunoglobulin 0.00000000000000753
Family I set domains 0.035
Further Details:      
 
Domain Number 11 Region: 2410-2490
Classification Level Classification E-value
Superfamily Immunoglobulin 0.0000000000000131
Family I set domains 0.023
Further Details:      
 
Domain Number 12 Region: 2132-2217
Classification Level Classification E-value
Superfamily Immunoglobulin 0.000000000000054
Family I set domains 0.069
Further Details:      
 
Domain Number 13 Region: 1843-1930
Classification Level Classification E-value
Superfamily Immunoglobulin 0.000000000000183
Family I set domains 0.082
Further Details:      
 
Domain Number 14 Region: 303-341
Classification Level Classification E-value
Superfamily LDL receptor-like module 0.000000000327
Family LDL receptor-like module 0.00094
Further Details:      
 
Domain Number 15 Region: 348-391
Classification Level Classification E-value
Superfamily LDL receptor-like module 0.000000000367
Family LDL receptor-like module 0.0016
Further Details:      
 
Domain Number 16 Region: 1541-1593
Classification Level Classification E-value
Superfamily EGF/Laminin 0.000000000391
Family Laminin-type module 0.0087
Further Details:      
 
Domain Number 17 Region: 745-797
Classification Level Classification E-value
Superfamily EGF/Laminin 0.000000000725
Family Laminin-type module 0.0047
Further Details:      
 
Domain Number 18 Region: 263-300
Classification Level Classification E-value
Superfamily LDL receptor-like module 0.00000000249
Family LDL receptor-like module 0.0012
Further Details:      
 
Domain Number 19 Region: 1140-1192
Classification Level Classification E-value
Superfamily EGF/Laminin 0.00000000586
Family Laminin-type module 0.015
Further Details:      
 
Domain Number 20 Region: 805-853
Classification Level Classification E-value
Superfamily EGF/Laminin 0.000000012
Family Laminin-type module 0.019
Further Details:      
 
Domain Number 21 Region: 179-217
Classification Level Classification E-value
Superfamily LDL receptor-like module 0.0000000628
Family LDL receptor-like module 0.0013
Further Details:      
 
Domain Number 22 Region: 1200-1245
Classification Level Classification E-value
Superfamily EGF/Laminin 0.00000067
Family Laminin-type module 0.022
Further Details:      
 
Domain Number 23 Region: 1600-1648
Classification Level Classification E-value
Superfamily EGF/Laminin 0.00000301
Family Laminin-type module 0.028
Further Details:      
 
Weak hits

Sequence:  ENSPTRP00000000536
Domain Number - Region: 1256-1303
Classification Level Classification E-value
Superfamily EGF/Laminin 0.000117
Family Laminin-type module 0.0064
Further Details:      
 
Domain Number - Region: 868-907
Classification Level Classification E-value
Superfamily EGF/Laminin 0.000446
Family Laminin-type module 0.029
Further Details:      
 
Domain Number - Region: 1504-1543
Classification Level Classification E-value
Superfamily EGF/Laminin 0.0067
Family EGF-type module 0.084
Further Details:      
 
Domain Number - Region: 1103-1142
Classification Level Classification E-value
Superfamily EGF/Laminin 0.00893
Family Laminin-type module 0.092
Further Details:      
 
Domain Number - Region: 707-747
Classification Level Classification E-value
Superfamily EGF/Laminin 0.0949
Family EGF-type module 0.048
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) Protein: ENSPTRP00000000536   Gene: ENSPTRG00000000307   Transcript: ENSPTRT00000000608
Sequence length 2804
Comment pep:novel chromosome:CHIMP2.1.4:1:21832249:21891353:-1 gene:ENSPTRG00000000307 transcript:ENSPTRT00000000608 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence 
LQVTHGLRAYDGLSLPEDIETVTASQMRWTHSYLSDDEDMLADSISGDDLGSGDLGSGDF
QMVYFRALVNFTRSIEYSPQLEDAGSREFREVSEAVVDTLESEYLKIPGDQVVSVVFIKE
LDGWVFVELDVGSEGNADGAQIQEVLLRVISSGSMASYITSPQGFQFRRLGTVPQFPRAC
TEAEFACHSYNECVALEYRCDRRPDCRDMSDELNCEEPVLGISPTFSLLVETTPLPPQPE
TTIMRQPPVTHAPQPLLPGSVRPLPCGPQEAACRSGHCIRRDYLCDGQEDCEDGSDELDC
GPPPPCEPNEFPCGNGHCALKLWRCDGDFDCEDRTDEANCPTKRPEEVCGPTQFRCVSTN
MCIPASFHCDEESDCPDRSDEFGCMPPQVVTPPRESIQASRGQTVTFTCVAIGVPTPIIN
WRLNWGHIPSHPRVTVTSEGGRGTLIIRDVKESDQGAYTCEAMNARGMVFGIPDGVLELV
PQRGPCPDGHFYLEHSAACLPCFCFGITSVCQSTRRFRDQIRLRFDQPDDFKGVNVTMPA
QPGMPPLSSTQLQIDPSLHEFQLVDLSRRFLVHDSFWALPEQFLGNKVDSYGGSLRYNVR
YELARGMLEPVQRPDVVLVGAGYRLLSRGHTPTQPGALNQRQVQFSEEHWVHESGRPVQR
VELLQVLQSLEAVLIQTVYNTKMASVGLSDIAMDTTVTHATSHGRAHSVEECRCPIGYSG
LSCESCDAHFTRVPGGPYLGTCSGCNCNGHASSCDPVYGHCLNCQHNTEGPQCNKCKAGF
FGDAMKATATACRPCPCPYIDASRRFSDTCFLDTDGQATCDACAPGYTGRRCESCAPGYE
GNPIQPGGKCRPVNQEIVRCDERGSMGTSGEACRCKNNVVGRLCNECADGSFHLSTRNPD
GCLKCFCMGVSRHCTSSSWSRAQVHGASEEPGHFSLTNAASTHTTNEGIFSPTPGELGFS
SFHRLLSGPYFWSLPSRFLGDKVTSYGGELRFTVTQRSQPGSTPLHGQPLVVLQGNNIIL
EHHVAQEPSPGQPSTFTVPFREQAWQRPDGQPATREHLLMALAGIDTLLIRASYAQQPAE
SRVSGISMDVAVPEETGQDPALEVEQCSCPPGYRGPSCQDCDTGYTRTPSGLYLGTCERC
SCHGHSEACEPETGACQGCQHHTEGPRCEQCQPGYYGDAQRGTPQDCQLCPCYGDPAAGQ
AAHTCFLDTDGHPTCDACSPGHSGRHCERCAPGYYGNPSQGQPCQRDSQVPGPIGCNCDP
QGSVSSQCDAAGQCQCKAQVEGLTCSHCRPHHFHLSASNPDGCLPCFCMGITQQCASSTY
TRHLISTHFAPGDFQGFALVNPQRNSRLTGEFTVKPVPEGAQLSFGNFAQLGHESFYWQL
PETYQGDKVAAYGGKLRYTLSYTAGPQGSPLSDPDVQITGNNIMLVASQPALQGPERSYE
IVFREEFWRRRDGQPPTREHLEMALADLDELCIRCTFSFVELAASIRQSLEVAQPGPSRT
PRPEVEECRCPPGYIGLSCQDCAPGYTRTGSGLYLGHCELCECNGHSDLCHPETGACSQC
QHNAAGEFCELCAPGYYGDATAGTPEDCQPCACPLTNPENMFSRTCESLGAGGYRCTACE
PGYTGQYCEQCGPGYVGNPSVQGGRCLPETNQAPLVVEVHPARSIVPQGGSHSLRCQVSG
SPPHYFYWSREDGRPVPSGTQQRHQGSELHFPSVQPSDAGVYICTCRNLHQSNTSRAELL
VTEAPSKPITVTVEEQRSQSVRPGADVTFICTAKSKSPAYTLVWTRLHNGKLPTRAMDFN
GILTIRNVQLSDAGTYMCTGSNMFAMDQGTATLHVQPQAPFSAPVVSIHPPQLTVQPGQL
AEFRCSATGSPTPTLEWTGGPGGQLPAKAQIHGGILRLPAVEPTDQAQYLCRAHTNKIQQ
VARAVLHVHGGGGPRVQVSPERTQVHEGRTVRLYCRAAGVPSATITWRKEGGSLPPQARS
ERTDIATLLIPAITTADAGFYLCVATSPAGTAQARIQVVVLSASDASPPPVKIESSSPSV
TEGQTLDLNCVVAGSAHAQVTWYRRGGSLPPHTQVHGSRLRLPQVSPADSGEYVCRVENG
SGPKEASITVSVLHGTHSGPSYTPVPGSTQPIRIEPSSSHVAEGQTLDLNCVVPGQAHAQ
VTWHKRGGSLPARHQTHGSLLRLYQVSPADSGEYVCRVLGSSVPLEASVLVTIEPAGSVP
GVTPTVRIESSSSHVAEGQTLDLNCLVAGQAHAQVTWHKRGGSLPARHQVHGSRLRLLQV
TPADSGEYVCRVVGSSGTQEASVHPALHLTLPAQGVAYPVRIESSSASLANGHTLDLNCL
VASQAPHTITWYKRGGSLPSRHQIVGSRLRIPQVTPADSGEYVCHVSNGAGSRETSLCVV
HTPLSPVPSVSPPIRIESSSPTVVEGQTLDLNCVVARQPQAIITWYKRGGSLPSRHQTHG
SHLRLHQMSVADSGEYVCRANNNIDALEASIGCADSLISVPPAPGSSMPIRIESSSSHVA
EGQTLDLNCVVPGQAHAQVTWHKRGGSLPSHHQTHGSRLRLHQVSPADSGEYVCRVMGSS
GPLEASVLVTIEASGSSAVHVPGGAPPIRIETSSSRVAEGQTLDLKCVVPGQAHAQVTWH
KRGGNLPARHQVHGPLLRLNQVSPADSGEYSCQVTGSSGTLEASVLVTIEPSSPGPIPAP
GLAQPIYIEASSSYVTEGQTLDLNCVVPGQAHAQVTWYKRGGSLPARHQTHGSQLRLHHV
SPADSGEYVCRAAGGPGPEQEASFTVTVPGSTVSRVKAPAPGGA
Download sequence
Identical sequences ENSPTRP00000000536 ENSPTRP00000000536

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]
Please cite: Gough, J., Karplus, K., Hughey, R. and Chothia, C. (2001). "Assignment of Homology to Genome Sequences using a Library of Hidden Markov Models that Represent all Proteins of Known Structure." J. Mol. Biol., 313(4), 903-919.

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© Copyright 2013 The SUPERFAMILY authors and Julian Gough.