SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for ENSPTRP00000014283 from Pan troglodytes 69_2.1.4

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  ENSPTRP00000014283
Domain Number 1 Region: 38-179
Classification Level Classification E-value
Superfamily Galactose-binding domain-like 7.8e-45
Family Discoidin domain (FA58C, coagulation factor 5/8 C-terminal domain) 0.0003
Further Details:      
 
Domain Number 2 Region: 724-750,785-938
Classification Level Classification E-value
Superfamily Concanavalin A-like lectins/glucanases 1.03e-37
Family Laminin G-like module 0.0016
Further Details:      
 
Domain Number 3 Region: 338-520
Classification Level Classification E-value
Superfamily Concanavalin A-like lectins/glucanases 9.68e-37
Family Laminin G-like module 0.0071
Further Details:      
 
Domain Number 4 Region: 153-339
Classification Level Classification E-value
Superfamily Concanavalin A-like lectins/glucanases 1.04e-36
Family Laminin G-like module 0.0039
Further Details:      
 
Domain Number 5 Region: 969-1173
Classification Level Classification E-value
Superfamily Concanavalin A-like lectins/glucanases 8.93e-31
Family Laminin G-like module 0.02
Further Details:      
 
Domain Number 6 Region: 580-637
Classification Level Classification E-value
Superfamily Fibrinogen C-terminal domain-like 0.000000000613
Family Fibrinogen C-terminal domain-like 0.0035
Further Details:      
 
Domain Number 7 Region: 551-587
Classification Level Classification E-value
Superfamily EGF/Laminin 0.0000173
Family EGF-type module 0.014
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) Protein: ENSPTRP00000014283   Gene: ENSPTRG00000008367   Transcript: ENSPTRT00000015424
Sequence length 1308
Comment pep:known chromosome:CHIMP2.1.4:16:75707943:75995183:1 gene:ENSPTRG00000008367 transcript:ENSPTRT00000015424 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence
MGSVTGAVLKTLLLLSTQNWNRVEAGNSYDCDDPLVSALPQASFSSSSELSSSHGPGFAR
LNRRDGAGGWSPLVSNKYQWLQIDLGERMEVTAVATQGGYGSSNWVTSYLLMFSDSGWNW
KQYRQEDSIWGFSGNANADSVVYYRLQPSIKARFLRFIPLEWNPKGRIGMRIEVFGCAYR
SEVVDLDGKSSLLYRFDQKSLSPIKDIISLKFKTMQSDGILLHREGPNGDHIILQLRRGR
LFLLINSGEAKLPSTSTLVNLTLGSLLDDQHWHSVLIQRLGKQVNFTVDEHRHHFHAQGE
FNLMNLDYEISFGGIPAPGKSVSFPHRNFHGCLENLYYNGVDIIDLAKQQKPQIIAMGNV
SFSCSQPQSMPVTFLSSRSYLALPDFSGEEEVSATFQFRTWNKAGLLLFSELQLISGGIL
LFLSDGKLKSNLYQPGKLPSDITAGVGLNDGQWHSVSLSAKKNHLSVAVDGQMASAAPLL
GPEQIYSGGTYYFGGCPDKSFGSKCKSPLGGFQGCMRLISISGKVVDLISVQQGSLGNFS
DLQIDSCGISDRCLPNYCEHGGECSQSWSTFHCNCTNTGYRGATCHNSIYEQSCEAYKHR
GNTSGFYYIDSDGSGPLEPFLLYCNMTETAWTIIQHNGSDLTRVRNTNPENPYAGFFEYV
ASMEQLQAAINRAEHCEQEFTYYCKKSRLVNKQDGTPLSWWVGRTNETQTYWGGSSPDLQ
KCTCGLEGNCIDSQYYCNCDADRNEWTNDTGLLAYKEHLPVTKIVITDTGRLHSEAAYKL
GPLLCRGDRSFWNSASFDTEASYLHFPTFHGELSADVSFFFKTTASSGVFLENLGITDFI
RIELRSPTVVTFSFDVGNGPFEISVQSPTHFNDNQWHHVRVERNMKEASLQVDQLTPKTQ
PAPADGHVLLQLNSQLFVGGTATRQRGFLGCIRSLQLNGMTLDLEERAQVTPEVQPGCRG
HCSSYGKLCRNGGKCRERPIGFFCDCTFSAYTGPFCSNEISAYFGSGSSVIYNFQENYLL
SKNSSSHAASFHGDMKLSREMIKFSFRTTRTPSLLLFVSSFYQEYLSVIIAKNGDLQIRY
KLNKYQEPDVVNFDFKNMADGQLHHVMINREEGVVFIEIDDNTRRQVHLSSGTEFSAVKS
LVLGRILEHSDVDQETALAGAQGFTGCLSAVQLSNVAPLKAALHPSHPDPVTVTGHVTES
SCMAQPGTDATSRERTHSFADHSGTIDDREPLANAIKSDSAVIGGLIAVVIFILLCITAI
AVRIYQQKSLYKRSEAKRSENVDSAEAVLKSELNIQNAVNENQKEYFF
Download sequence
Identical sequences ENSPTRP00000014283 ENSPTRP00000014283 9598.ENSPTRP00000014283

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]