SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for ENSPTRP00000053441 from Pan troglodytes 69_2.1.4

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  ENSPTRP00000053441
Domain Number 1 Region: 17-64
Classification Level Classification E-value
Superfamily RING/U-box 0.0000000000164
Family RING finger domain, C3HC4 0.0097
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) Protein: ENSPTRP00000053441   Gene: ENSPTRG00000005948   Transcript: ENSPTRT00000010922
Sequence length 726
Comment pep:known chromosome:CHIMP2.1.4:13:78594951:78639270:-1 gene:ENSPTRG00000005948 transcript:ENSPTRT00000010922 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence
MAQTVQNVTLSLTLPITCHICLGKVRQPVICINNHVFCSICIDLWLKNNSQCPACRVPIT
PENPCKEIIGGTSESEPMLSHTVRKHLRKTRLELLHKEYEDEIDCLQKEVEELKSKNLSL
ESQIKTILDPLTLVQGNQNEDKHLVTDNPSKINPETVAEWKKKLRTANEIYEKVKDDVDK
LKEANKKLKLENGGLVRENLRLKAEVDNRSPQKFGRFAVAALQSKVEQYERETNRLKKAL
ERSDKYIEELESQVAQLKNSSEEKEAMNSICKTALSADGKGSKGSEEDVASKNQGDSARK
QPGSSTSSSSHLAKPSSSRLCDTSSARQESTSKADLNCSKNKDLYQEQVEVMLDVTDTSM
DTYLEREWGNKPSDCVPYKDEELYDLPAPCTPLSLSCLQLSTPENRESSVVQAGGSKKHS
NHLRKLVFDDFCDSSNVSNKDSSEDDISRSENEKKSECFSSPKTGFWDCCSTSYAQNLDF
ESSEGNTIANSVGEISSKLSEKSGLCLSKRLNSIRSFEMNRTRTSSEASMDAAYLDKISE
LDSMMSESDNSKSPCNNGFKSLDLDGLSKSSQGSEFLEEPDKLEEKTELNLSKGSLTNDQ
LENGSEWKPTSFFLLSPSDQEMNEDFSLHSSSCPVTNEIKPPSCLFQTEFSQGILLSSSH
RLFEDQRFGSSLFKMSSEMHSLHNHLQSPWSTSFVPEKRNKNVNQSTKRKIQSSLSNASP
SKATKS
Download sequence
Identical sequences H2RA20
XP_001142259.2.37143 ENSPTRP00000053441 9598.ENSPTRP00000053441 ENSPTRP00000053441

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]