SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for ENSPTRP00000035315 from Pan troglodytes 69_2.1.4

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  ENSPTRP00000035315
Domain Number 1 Region: 669-696
Classification Level Classification E-value
Superfamily CCCH zinc finger 0.000017
Family CCCH zinc finger 0.0033
Further Details:      
 
Domain Number 2 Region: 776-798
Classification Level Classification E-value
Superfamily CCCH zinc finger 0.000068
Family CCCH zinc finger 0.0058
Further Details:      
 
Weak hits

Sequence:  ENSPTRP00000035315
Domain Number - Region: 742-775
Classification Level Classification E-value
Superfamily CCCH zinc finger 0.000581
Family CCCH zinc finger 0.0044
Further Details:      
 
Domain Number - Region: 724-746
Classification Level Classification E-value
Superfamily CCCH zinc finger 0.0102
Family CCCH zinc finger 0.0034
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) Protein: ENSPTRP00000035315   Gene: ENSPTRG00000020655   Transcript: ENSPTRT00000038199
Sequence length 952
Comment pep:known chromosome:CHIMP2.1.4:8:142333948:142440207:-1 gene:ENSPTRG00000020655 transcript:ENSPTRT00000038199 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence
MEEKEILRRQIRLLQGLIDDYKTLHGNAPAPGTPAASGWQPPTYHSGRAFSARYPRPSRR
GYSSHHGPSWRKKYSLVNRPPGPSDPPADHAVRPLHGARGGQAPVPQQHVLERQVQFSQG
QNVVIKVKPPSKSGSASASGAQRGSLEEYEDNPWSDQRPREGEGEPPRGQLQPSRPTRAR
GTCSVEDPLLVCQKEPGKPRMVKSVGSVGDSPREPHRTVSESVIAVKASFPSSALPPRTG
VALGRKLGSHSVASCAPQLLGDRRVDAGHTDQPVPSGSVGGPARPASGPRQAREASPVVT
CRTNKFRKNNYKWVAASAKSPRAARRALSPRVAAENVCKASAGMANKVEKPQLIADPEPK
PRKPATSSKPGSAPSKYKWKASSPSASSSSSFRWQSEAGSKDHASQLSPVLSRSPSGDRP
AVGHSGLKPLSGETPLSAYKVKSRTKIIRRRGSTSLPGDKKSSTSPATTAKSHLSLRRRQ
ALRGKSSPVLKKTPNKGLVQVTTHRLCRLPPSRAHLPTKEASSLHAVRTAPTSKVIKTRY
RIVKKTPASPLSTPPFPVSLPSWRARRLSLSRSLVLNRLRPVASGGGKAQPGSPRWRSKG
YRCIGGVLYKVSANKLSKTSGQPSDAGSRPLLRTGRLDPAGSCSRSLASRAVQRSLAIIR
QARQRREKRKEYCMYYNRFGRCNRGERCPYIHDPEKVAVCTRFVRGTCKKTDGTCPFSHH
VSKEKMPVCSYFLKGICSNSNCPYSHVYVSRKAEVCSDFLKGYCPLGAKCKKKHTLLCPD
FARRGACPRGAQCQLLHRTQKRHSRRAATSPAPGPSDATARSRVSASHGPRKPSASQRPT
RQTPSSAALTAAALAAPPHCPGGSASPASSKASSSSSSCSSSSSSPPASLDHEAPSLQEA
ALAAACSNRLCKLPSFISLQSSPSPGAQPRVRAPRAPLTKDSGKPLHIKPRL
Download sequence
Identical sequences ENSPTRP00000035315 9598.ENSPTRP00000035315 ENSPTRP00000035315

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]