SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for ENSSARP00000011902 from Sorex araneus 76_1

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  ENSSARP00000011902
Domain Number 1 Region: 256-300
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 0.00000000000000717
Family Classic zinc finger, C2H2 0.0077
Further Details:      
 
Domain Number 2 Region: 289-325
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 0.000000000299
Family Classic zinc finger, C2H2 0.0022
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) Protein: ENSSARP00000011902   Gene: ENSSARG00000013181   Transcript: ENSSART00000013180
Sequence length 327
Comment pep:known_by_projection genescaffold:COMMON_SHREW1:GeneScaffold_1244:8185:24213:1 gene:ENSSARG00000013181 transcript:ENSSART00000013180 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence
VTGSVQIREPPQRAERGNTTPSQLLDMNPMENQVLLKDIKIEPPELLANDFNLPQVEPVD
LSFHKPKTPLQPASMLQAPICSPKSQPTSQTLVVSTSTPDTSTSTNISTPGCVLASQNKG
SQSILHVIHTVPAVSLPNKMNRLKAIPVVVQSLPMVYTTLPADGSPVAITVPLIGGDGKN
IGSVKVDPISMSPLDFPSDSEDSTKESGYSSLLGIRGKLKEPASMTQVKRKESFDFKRRR
THQCDFEGCNKVYTKSSHLKAHHRIHTGEKPYKCTWDGCSWKFARSDELTRHFRKHTGIK
PFQCTDCSRSFSRSDHLSLHRRRHDTM
Download sequence
Identical sequences ENSSARP00000011902 ENSSARP00000011902

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]