SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for ENSSARP00000001043 from Sorex araneus 76_1

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  ENSSARP00000001043
Domain Number 1 Region: 609-682
Classification Level Classification E-value
Superfamily Glucocorticoid receptor-like (DNA-binding domain) 3.46e-20
Family Nuclear receptor 0.0000798
Further Details:      
 
Domain Number 2 Region: 845-888
Classification Level Classification E-value
Superfamily Nuclear receptor ligand-binding domain 0.000000781
Family Nuclear receptor ligand-binding domain 0.0019
Further Details:      
 
Weak hits

Sequence:  ENSSARP00000001043
Domain Number - Region: 942-990
Classification Level Classification E-value
Superfamily Nuclear receptor ligand-binding domain 0.000237
Family Nuclear receptor ligand-binding domain 0.001
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) Protein: ENSSARP00000001043   Gene: ENSSARG00000001143   Transcript: ENSSART00000001135
Sequence length 992
Comment pep:known_by_projection genescaffold:COMMON_SHREW1:GeneScaffold_4261:4307:209374:-1 gene:ENSSARG00000001143 transcript:ENSSART00000001135 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence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Download sequence
Identical sequences ENSSARP00000001043 ENSSARP00000001043

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]