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Domain assignment for ENSSARP00000001388 from Sorex araneus 76_1

Domain architecture


Domain assignment details

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Strong hits

Sequence:  ENSSARP00000001388
Domain Number 1 Region: 20-107
Classification Level Classification E-value
Superfamily Retrovirus capsid dimerization domain-like 2.66e-33
Family SCAN domain 0.0000215
Further Details:      
 
Domain Number 2 Region: 345-397
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 0.0000000000000482
Family Classic zinc finger, C2H2 0.0085
Further Details:      
 
Domain Number 3 Region: 280-306
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 0.00000105
Family Classic zinc finger, C2H2 0.014
Further Details:      
 
Weak hits

Sequence:  ENSSARP00000001388
Domain Number - Region: 204-235
Classification Level Classification E-value
Superfamily KRAB domain (Kruppel-associated box) 0.00017
Family KRAB domain (Kruppel-associated box) 0.0096
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) Protein: ENSSARP00000001388   Gene: ENSSARG00000001533   Transcript: ENSSART00000001527
Sequence length 402
Comment pep:known_by_projection genescaffold:COMMON_SHREW1:GeneScaffold_6532:135177:138342:1 gene:ENSSARG00000001533 transcript:ENSSART00000001527 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence
PVPPALQSLPMDPAASLEEPEAARLRFRGFCYWDVASPREALSRLWELCRQWLLPEVRSK
EQMLELLVLEQFLSALPPEIQAWVRGQQPGSPDMAASLVEGLQQEPEQLLGWITAHVLKR
EMLPAAETTEELLGSPCPSGTGEPTQAAPEERPVLFHHCVKEEPDTDGQKTVPCSSSAPA
PSQERHLRHQKLMSSTFPAPRITSQKELSWDMMLEKYGTVVSLGLPEAQPGVMRLFGPDR
SSGEEAKPPKGLGPVAWAGLSGTTVPAPLGAEPEYSGPLRKPYICEQCGQGFDWKSVFVI
HLRTHAWGQSACAQTQASGATEKLLKGPQEPAVSRHLRCTLTGPRSYACDECGRSFSWKS
QLVIHRKSHTGQRRHFCSDCGCGFDWKSQLVIHRKSHRSETS
Download sequence
Identical sequences ENSSARP00000001388 ENSSARP00000001388

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