SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for jgi|PhycaF7|74879|fgenesh1_pg.C_scaffold_0000454 from Phytophthora capsici

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  jgi|PhycaF7|74879|fgenesh1_pg.C_scaffold_0000454
Domain Number 1 Region: 759-805,1015-1259
Classification Level Classification E-value
Superfamily Zn-dependent exopeptidases 3.28e-61
Family Bacterial dinuclear zinc exopeptidases 0.0071
Further Details:      
 
Domain Number 2 Region: 419-687
Classification Level Classification E-value
Superfamily Metallo-hydrolase/oxidoreductase 1.19e-49
Family Zn metallo-beta-lactamase 0.091
Further Details:      
 
Domain Number 3 Region: 1-193
Classification Level Classification E-value
Superfamily Nucleotidylyl transferase 7.41e-37
Family Class I aminoacyl-tRNA synthetases (RS), catalytic domain 0.0001
Further Details:      
 
Domain Number 4 Region: 215-265
Classification Level Classification E-value
Superfamily YegP-like 0.000000000484
Family YegP-like 0.004
Further Details:      
 
Domain Number 5 Region: 860-944
Classification Level Classification E-value
Superfamily PA domain 0.00000102
Family PA domain 0.02
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) jgi|PhycaF7|74879|fgenesh1_pg.C_scaffold_0000454
Sequence length 1540
Sequence
MAADILIFKANQVPVGRDQIQHIEMARDFAQRFNHVYGKEYFPLPDVVIDEQVATLAGLD
GRKMSKSYHNTIPLFVPREELKKLVFSILTDSRAPGEPKDTEGSALFQMYQAFATPEQTA
EFAKAFAAGISWGDAKQQLFERIDSELSPLRERYNALMAEPEKIEALLKRRGQQLRERLA
APLLEELRHAVGLRDLSSAGDIASEDAGVARVAPPLFKQYREKDGRFYFKLTAGDGTLLI
QSEGFDSPRDAGQLIAVIKQAEQGDQLQSELFKLEAEVDAVLAALASRAMLDFAPPLARG
MMSARLRRDDMESAMAWLSLLLFLPWFLLLGSLYWLFPRQPRTPRRRLFDSTTLVLAFAL
SIVSMLWGYRIGVVQPGAGPIWPQVLAVLYAYGAFLAVLVLALMLRPRWLDRCVPMTADP
SIHTIDTGFQRPDFDAAYLIVENGRAAFVDCGTGLSVPAMLQALADAGLGVDAVDWLLLT
HVHLDHAGGAGLLMQQLPNAKAVLHPRGAPHMIDPTRLIAGATAVYGAEEIARSYGRIEP
IPAQRVVVAEDGHRIDLAGRELVLLHTPGHALHHYCVWDARSRSWFTGDTFGISYRELDS
TQGAFIFPTSSPVQFDPEAMKASIRRMLGYGPQAMYLTHYGRVEQVEKLADDLFEQIDAM
AAIGRQCDGRPDRHRCLLAALQALYLERAQLHGCALDDAAVTAVLAMDIELNAQGLACWL
DRISSRGTAVNPMRVLLLSSCLFVGGLAHAANDLPGGGIDPQALSRHVRVLASDEFEGRA
PATEGEERTVQYLIEQFRSYGLQPGGVDGSWVQPVPLVRAQLDGPAKASLSLKQGKRALA
NGVDVTLQSLQPRKRVQIKNAPLVFVGYGIDAPERQWNDYKDVDLHGKIAVMLINDADFE
ADAPGAFDGKAVTYYGRWTYKFEEAARRGAEGVLIVHETAPAAYGWATVKSSGTSPLFDI
ERSQAEAMAQHTPLRGWMQRELAEAIFADAGLDFDAEKRKAMRADFRPVALDNAKLSVDF
ALKREQVVTRNVVAKLPGGEHGDEAVIFSAHWDAFGIGQADAKGDRIRRGAIDNATGVAT
VLELGRVFAAGPQPQRTLYFVALTAEEKGLLGASYYATHPLAPLDKTAAVLNIEMFSPDG
PTRDIASWGKGRVSLEGDLERVAKARGRSYSPDPNLEAGFFYRADHFAFARLGVPAITIG
PGLDKLDGGVEAGRALREKYFADCYHQACDAWTPSWDPSGHAADTLLVYDLGAELANSRR
WPTRSCSELWPLPRSTASCSASAPQNTSRAIPNPMRGHAACALGRRSSQASAVAAASVAA
IHISGVAGDAAATGSAPVAAITATRLLAGAVEPVRALVDSEPVDMAGLQRALVQQRGGAT
EQRVGQRVTQAHAQCTHVGGEQLGLHHRVDRGVAGEDDEGHGQGQEGQGGVMLVRQLGDQ
KATVPPAVIRKHSSSGRHWCTNSSYIEPDFCALPSRAASMDDSDSDSSMPRRSQNTTTAA
MPPMPKAMRQPHSEISGLPQKVSISSRVSWASTWPPTRVT
Download sequence
Identical sequences jgi|PhycaF7|74879|fgenesh1_pg.C_scaffold_0000454

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]