SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for gi|427705775|ref|YP_007048152.1| from Nostoc sp. PCC 7107

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  gi|427705775|ref|YP_007048152.1|
Domain Number 1 Region: 82-159
Classification Level Classification E-value
Superfamily 4Fe-4S ferredoxins 0.00000000000000586
Family 7-Fe ferredoxin 0.087
Further Details:      
 
Weak hits

Sequence:  gi|427705775|ref|YP_007048152.1|
Domain Number - Region: 153-291
Classification Level Classification E-value
Superfamily Thiamin phosphate synthase 0.0785
Family Thiamin phosphate synthase 0.035
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) gi|427705775|ref|YP_007048152.1|
Sequence length 389
Comment 4Fe-4S ferredoxin [Nostoc sp. PCC 7107]
Sequence
MTDLFAPLHSLEKGHWFKLICGASYQHLPAVRSLTLAYTLAGADCIDVAADPAVIAAAQA
ALQVAKTLTMEAQQRSFNYQGGSPLLMVSLNDGEDPHFRKADFDALQCPSDCPRPCERVC
PAQAIAFNRTQDNFAGVESHKCYGCGRCIPICPYGIIYSSSYMSTPEAIAPMVISTGVDA
VEIHTQVGRFKEFQKLWQAISPWAEQLKLLAISCPDGEGMIEYLNAIYQLITPRPHTLIW
QTDGRPMSGDIGDGTTQAAVKLGQKVLAANLPGYVQLAGGTNSYTVAKLKAMGLLKEARE
QGSRGARVKDSSFPSAPLPLCPSASIAGVAYGSYARVLLSPILEQLENKEVNNTSVKATV
HLEAEPDLLWEAVALAHSLVSQIKSQQER
Download sequence
Identical sequences K9Q871
gi|427705775|ref|YP_007048152.1| WP_015111243.1.60169

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]