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Domain assignment for gi|427710027|ref|YP_007052404.1| from Nostoc sp. PCC 7107

Domain architecture


Domain assignment details

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Strong hits

Sequence:  gi|427710027|ref|YP_007052404.1|
Domain Number 1 Region: 23-347
Classification Level Classification E-value
Superfamily Pectin lyase-like 1.04e-40
Family Filamentous hemagglutinin FhaB, secretion domain 0.018
Further Details:      
 
Domain Number 2 Region: 488-676
Classification Level Classification E-value
Superfamily Pectin lyase-like 0.00000000000408
Family Filamentous hemagglutinin FhaB, secretion domain 0.035
Further Details:      
 
Domain Number 3 Region: 344-483
Classification Level Classification E-value
Superfamily Pectin lyase-like 0.0000534
Family iota-carrageenase 0.082
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) gi|427710027|ref|YP_007052404.1|
Sequence length 879
Comment filamentous hemagglutinin family outer membrane protein [Nostoc sp. PCC 7107]
Sequence
MKITFAHFSLIGAIYILALGNSRIQAQVIPDGTLNTAVSGSNSYTITGGTVVGNNLFHSF
SQFYIPSNGSVAFSSTSGIQNIFSRVTGGDVSYINGSITTNSGVNLFLLNPAGIIFGANA
RLNVGGSFIGTTANSIKFADGREFGAVDTSATTLLTMSVPIGLQMGSNSGAINVYGAKLA
IPARNTFALVGNNLTFDQSTITATDGKVELGSVAANNLVGLSVNTAGFSLDFNGVTQFQN
INFSNAAKVDTSGNQGGAIALQGQKITLSGSSTITSHTLGTGSGQGILVKASESLELIGQ
PALSNTAIAAYSQPTARGRGGDVTIETPLLNVLNGAQINTRAYGIGDSGNITVKSTTVNV
IGEAIYTPTKQRFSVSTLASNTMNNSQGRGGNVKIDATQVNIRDGAELRSTARGTGDGGN
IIVIAKNLSVTGETATNEPAFLTGMSTSIRENATGRGGDIILNVGKLEVLNGPGIRTGTY
GEGTSGDIIVNADEVTVAGSSSTGVASRFFASTNGNYDFATEKLISLGQGQGGNITFNVG
QLNLLDGGRISTSTETYGTAGNISIQANSVNIAGVSQAPNGQLLYSLDATGPSGLYASST
GPGTAGSVHLTTENLSLSDHGEIVVSGKGTGNAGNMVIQANYLKLDQAGKLRSEANAGEG
GNIDLQVRDVLLMRHGSFISAEAGGNGGNITINAPNIVGLENSDIIANAVQGRGGNIHIT
TQGIIGLKYGNLLNPREVLTNDITASSQFNVNGTVQINNIGVDPNSGLVELPKNLTDPSQ
QIASGCANETGSSFVATGRGGVPENPTEEIRSDRTWSDIRDISAFHKTKSVQAQIPPSPE
VLIQATSWHRNANGKIELIANQSPSHVQTALTCAAVPKN
Download sequence
Identical sequences K9QJI5
WP_015115445.1.60169 gi|427710027|ref|YP_007052404.1|

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