SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for gi|427710265|ref|YP_007052642.1| from Nostoc sp. PCC 7107

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  gi|427710265|ref|YP_007052642.1|
Domain Number 1 Region: 36-165,192-352
Classification Level Classification E-value
Superfamily Pectin lyase-like 2.07e-43
Family Filamentous hemagglutinin FhaB, secretion domain 0.0064
Further Details:      
 
Domain Number 2 Region: 355-475
Classification Level Classification E-value
Superfamily Pectin lyase-like 0.000000000016
Family Filamentous hemagglutinin FhaB, secretion domain 0.057
Further Details:      
 
Domain Number 3 Region: 476-671
Classification Level Classification E-value
Superfamily Pectin lyase-like 0.000000000157
Family Filamentous hemagglutinin FhaB, secretion domain 0.075
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) gi|427710265|ref|YP_007052642.1|
Sequence length 1024
Comment filamentous hemagglutinin family outer membrane protein [Nostoc sp. PCC 7107]
Sequence
MWLKLTINLSLFAAIAYTRIPYTLAQQIKADVYLPLNQRTQVTNNSPNFQIDGGATQSTN
LFHSFSEFSVPVGGEAFFNNATTVQNIISRVTGSIPSNIQGTIRANGTANLFLINPQGII
FGPNARLNIGGSFIASTASSVTFADGIEFSATNPDATPLLTINQPIGLQFGTNPGRIENQ
SRTTDSLNQLIGLQVQTNTTLALVGGDLTLTGGVLTAPNGRIELGSVGSNSVVNLTSTSI
GYTLNYEGVNDFQNINLRQRATATTIGSLGGSIHLQGANISLTDGSLVQVGIFGNGIGEG
LTVNASESVQLIGSNNRLFTLNEGTAISGDLTITSPRLLLQDGAEVVSSTTGVRKSGNLN
IHTSELLQVTGSGSRLFTQTESTAANAGNSGNLTIHTGNLLIQNRGQITVNTLGAGDGGN
LTVNATKSVELVGRDSRLLTQAQGLGNTGNLTITTPILRISDGAQVSVSTLGAGNGGNLS
VNTSESTQLIGRSQDGQFASGLFNQAESQATGNAGNIIITSPVLRILDGAQVSLSTLGVG
NGGNLTVNTSESTQLIGRSQDGQFASGLFNQTQGSGNAGNIIITSPVLRILDGAQVSLGT
LGTGNGGNLTVNTSESTQLIGRSQDGQFASGLFNQTESQATGNSGDLTINTPILQVFDGA
QVSAGTLGAGNGGNLTVNTTETVELIGRSSDQTFPSGLFSQTQGTGDAGAIRITTPELRI
LDGAEISAATLATGKGGNVIIKASDNLRVQNGSQISVSSTENVAEAGNIDVTAGLVQLDG
GKITAQTLSGNGGDIRLSIANLLFLRRGSTISTTAGTNASGGDGGNIKIKIPNGFVVAIP
SENTDITANAFTGSGGRIDITAQNLFGIQSRPFNTPTSDITASSEFGINGVVNINTPDVD
PARGVLVLSTNIIDSSQLIEQSCAAVNSSQGSQLTVAGRGGLPVDPNEPLSSEVVWSDTR
LRNRTAQIYPHRATHTQLPKVVDIPNLIPATGWIFNNQGQVKLVAHTSTATSNTSLSIPT
CHNR
Download sequence
Identical sequences K9QL09
gi|427710265|ref|YP_007052642.1| WP_015115680.1.60169

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]