SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for ENSCHOP00000004421 from Choloepus hoffmanni 69_1

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  ENSCHOP00000004421
Domain Number 1 Region: 342-535
Classification Level Classification E-value
Superfamily GTPase activation domain, GAP 3.14e-53
Family BCR-homology GTPase activation domain (BH-domain) 0.00011
Further Details:      
 
Domain Number 2 Region: 66-168
Classification Level Classification E-value
Superfamily PH domain-like 0.0000000000000142
Family Pleckstrin-homology domain (PH domain) 0.011
Further Details:      
 
Domain Number 3 Region: 180-261
Classification Level Classification E-value
Superfamily Ubiquitin-like 0.00000000367
Family Ras-binding domain, RBD 0.029
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) Protein: ENSCHOP00000004421   Gene: ENSCHOG00000004989   Transcript: ENSCHOT00000005008
Sequence length 1176
Comment pep:novel genescaffold:choHof1:GeneScaffold_3752:3562:82428:-1 gene:ENSCHOG00000004989 transcript:ENSCHOT00000005008 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence
RSSSLTEVSRIAGGPDIKKKMKTLAERRKSAPSLILDKALQKWPSTKESPSASMDSCAFL
SSFVCSNRTLLIDGRVELKRGLQRQERHLFLFNDLFVVAKIKYNNNFKIKNKIKLSDMWT
ASCVDEVGEGNTNAMKSFVLGWPTVNFVATFSSPEQKDKWLSLLQRYINLEKEKDYPKSI
PLKIFAKDIGNCAYSKTLTVMNSDTANDVINMSLPMLGITGSERDYQLWVNSGKEAAPYP
LIGHEYPYGIKMSHLRDSALLTQRLKDSSTPSNFQEPFLMEQLPREMQCQFILKPSRLAA
AQHLSDSGQKTFKRRRSLINWAFWRGSSIHLDHLPMSPTSPMPGQLFGVSLPNICENDNL
PKPVLDMLFFLNQKGPLTKGIFRQSANVKSCRELKEKLNSGVKAHLDCESIFVIASVLKD
FLRNIPGSIFSSALYDHWVSVMDQGNDEEKINTIQRLLEQLPRANVVLLRYLFGLLYNIE
QHSSSNQMTAFNLAVCIAPSILWPPTSSSPELENEFTKKVSLLIQFLIENCCRIFGEEIT
SLLGEISVRCDNRENASDISCFQLNDSSYDSLENELNEDVDAPCSDLVKKLGQGSRSMDS
VLTLSDYDPDQPEMEGLLALSDFDLDRSKDEEVQMKQPLESKPVNVSVGYTKVPPQDQAR
TPSGVCTPGHPFTAAADAPKSLRRHRRCSEPSIDCLDSKLSYLREFYQKKLHKSSCDAIL
SQKDEDYLKQNQTLQEEGKTCFEQSLVIGTASSKKNATHQSVKKKSLSSNEGNHVKLFPK
SKPVAISPASYSHLTSQEHSRNPPSGADLPEYFPPHTADVLKSSRRYRRCSEPNIDDQHY
KLTYLRGIYSKKQHKTSYEAGVFHGEEEYLKRHKSLQMEGQKLINQSLVMGIEVGKSSAT
NQNTEKVLPPRLNICPRTSYSSLSSSGTSPSGSSVSSQDSAFSQISEHSVFTPTETSSPI
DCTFQAQRKQEKLSSDFSSSRLVSTMPSPPSGQASSRLAYTKKDPGEWHSQMHSVTLHPS
TWLKSSVTNLKNWSLKKKAKSWRPEEKNIGSLKGPTEPPPHVFDVPEASALQERHKNLPL
RAAKGLGAAQTAQWYDSYPCQDSEKQCSSPFSLVEDRLTLCMKSHEEAEDGGPCPPGTLP
WERSSPSSLTADEISSPDSGPTAVCSDGDRHFTKDI
Download sequence
Identical sequences ENSCHOP00000004421 ENSCHOP00000004421

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]