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  Home > Genomes > Choloepus hoffmanni 69_1 > ENSCHOP00000003882

Domain assignment for ENSCHOP00000003882 from Choloepus hoffmanni 69_1

Domain architecture

Domain assignment details

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Strong hits

Sequence:  ENSCHOP00000003882
Domain Number 1 Region: 4858-5019
Classification Level Classification E-value
Superfamily GFP-like 2.41e-37
Family Domain G2 of nidogen-1 0.0039
Further Details:      
 
Domain Number 2 Region: 2462-2561
Classification Level Classification E-value
Superfamily Immunoglobulin 1.82e-25
Family I set domains 0.015
Further Details:      
 
Domain Number 3 Region: 3567-3659
Classification Level Classification E-value
Superfamily Immunoglobulin 2.5e-24
Family I set domains 0.008
Further Details:      
 
Domain Number 4 Region: 3182-3283
Classification Level Classification E-value
Superfamily Immunoglobulin 6.03e-24
Family I set domains 0.0038
Further Details:      
 
Domain Number 5 Region: 2570-2657
Classification Level Classification E-value
Superfamily Immunoglobulin 1.8e-23
Family I set domains 0.0095
Further Details:      
 
Domain Number 6 Region: 2381-2469
Classification Level Classification E-value
Superfamily Immunoglobulin 4.86e-23
Family I set domains 0.018
Further Details:      
 
Domain Number 7 Region: 1166-1263
Classification Level Classification E-value
Superfamily Immunoglobulin 8.44e-23
Family I set domains 0.01
Further Details:      
 
Domain Number 8 Region: 3648-3746
Classification Level Classification E-value
Superfamily Immunoglobulin 1.15e-22
Family I set domains 0.012
Further Details:      
 
Domain Number 9 Region: 2101-2196
Classification Level Classification E-value
Superfamily Immunoglobulin 2.51e-22
Family I set domains 0.0067
Further Details:      
 
Domain Number 10 Region: 889-983
Classification Level Classification E-value
Superfamily Immunoglobulin 3.66e-22
Family I set domains 0.012
Further Details:      
 
Domain Number 11 Region: 1086-1177
Classification Level Classification E-value
Superfamily Immunoglobulin 4.74e-22
Family I set domains 0.014
Further Details:      
 
Domain Number 12 Region: 4101-4199
Classification Level Classification E-value
Superfamily Immunoglobulin 4.84e-22
Family I set domains 0.017
Further Details:      
 
Domain Number 13 Region: 3276-3376
Classification Level Classification E-value
Superfamily Immunoglobulin 9.28e-22
Family I set domains 0.0085
Further Details:      
 
Domain Number 14 Region: 2918-3013
Classification Level Classification E-value
Superfamily Immunoglobulin 1.11e-21
Family I set domains 0.0091
Further Details:      
 
Domain Number 15 Region: 4282-4374
Classification Level Classification E-value
Superfamily Immunoglobulin 1.41e-21
Family I set domains 0.0081
Further Details:      
 
Domain Number 16 Region: 42-218
Classification Level Classification E-value
Superfamily vWA-like 1.93e-21
Family Integrin A (or I) domain 0.025
Further Details:      
 
Domain Number 17 Region: 3011-3095
Classification Level Classification E-value
Superfamily Immunoglobulin 5.57e-21
Family I set domains 0.0079
Further Details:      
 
Domain Number 18 Region: 4015-4108
Classification Level Classification E-value
Superfamily Immunoglobulin 7.92e-21
Family I set domains 0.028
Further Details:      
 
Domain Number 19 Region: 4190-4285
Classification Level Classification E-value
Superfamily Immunoglobulin 1.53e-20
Family I set domains 0.018
Further Details:      
 
Domain Number 20 Region: 3924-4021
Classification Level Classification E-value
Superfamily Immunoglobulin 1.84e-20
Family I set domains 0.018
Further Details:      
 
Domain Number 21 Region: 3740-3839
Classification Level Classification E-value
Superfamily Immunoglobulin 1.98e-20
Family I set domains 0.0052
Further Details:      
 
Domain Number 22 Region: 1727-1823
Classification Level Classification E-value
Superfamily Immunoglobulin 3.35e-20
Family I set domains 0.0082
Further Details:      
 
Domain Number 23 Region: 2007-2106
Classification Level Classification E-value
Superfamily Immunoglobulin 3.65e-20
Family I set domains 0.0084
Further Details:      
 
Domain Number 24 Region: 3384-3470
Classification Level Classification E-value
Superfamily Immunoglobulin 3.76e-20
Family I set domains 0.01
Further Details:      
 
Domain Number 25 Region: 1917-2013
Classification Level Classification E-value
Superfamily Immunoglobulin 5.05e-20
Family I set domains 0.023
Further Details:      
 
Domain Number 26 Region: 624-704
Classification Level Classification E-value
Superfamily Immunoglobulin 5.09e-20
Family I set domains 0.012
Further Details:      
 
Domain Number 27 Region: 3459-3559
Classification Level Classification E-value
Superfamily Immunoglobulin 1.07e-19
Family I set domains 0.025
Further Details:      
 
Domain Number 28 Region: 1555-1640
Classification Level Classification E-value
Superfamily Immunoglobulin 1.16e-19
Family I set domains 0.008
Further Details:      
 
Domain Number 29 Region: 1350-1449
Classification Level Classification E-value
Superfamily Immunoglobulin 2.93e-19
Family I set domains 0.021
Further Details:      
 
Domain Number 30 Region: 1634-1734
Classification Level Classification E-value
Superfamily Immunoglobulin 9.3e-19
Family I set domains 0.0063
Further Details:      
 
Domain Number 31 Region: 3089-3187
Classification Level Classification E-value
Superfamily Immunoglobulin 1.68e-18
Family I set domains 0.01
Further Details:      
 
Domain Number 32 Region: 2190-2287
Classification Level Classification E-value
Superfamily Immunoglobulin 7.82e-18
Family I set domains 0.0077
Further Details:      
 
Domain Number 33 Region: 1279-1361
Classification Level Classification E-value
Superfamily Immunoglobulin 1.02e-17
Family I set domains 0.0063
Further Details:      
 
Domain Number 34 Region: 516-609
Classification Level Classification E-value
Superfamily Immunoglobulin 1.27e-17
Family I set domains 0.015
Further Details:      
 
Domain Number 35 Region: 700-789
Classification Level Classification E-value
Superfamily Immunoglobulin 1.57e-17
Family I set domains 0.03
Further Details:      
 
Domain Number 36 Region: 981-1074
Classification Level Classification E-value
Superfamily Immunoglobulin 1.02e-16
Family I set domains 0.0097
Further Details:      
 
Domain Number 37 Region: 4519-4577
Classification Level Classification E-value
Superfamily TSP-1 type 1 repeat 6.67e-16
Family TSP-1 type 1 repeat 0.0003
Further Details:      
 
Domain Number 38 Region: 3831-3925
Classification Level Classification E-value
Superfamily Immunoglobulin 0.00000000000000241
Family I set domains 0.019
Further Details:      
 
Domain Number 39 Region: 4576-4634
Classification Level Classification E-value
Superfamily TSP-1 type 1 repeat 0.0000000000000144
Family TSP-1 type 1 repeat 0.00019
Further Details:      
 
Domain Number 40 Region: 4465-4520
Classification Level Classification E-value
Superfamily TSP-1 type 1 repeat 0.0000000000000628
Family TSP-1 type 1 repeat 0.00027
Further Details:      
 
Domain Number 41 Region: 4634-4691
Classification Level Classification E-value
Superfamily TSP-1 type 1 repeat 0.0000000000000798
Family TSP-1 type 1 repeat 0.00028
Further Details:      
 
Domain Number 42 Region: 4748-4805
Classification Level Classification E-value
Superfamily TSP-1 type 1 repeat 0.000000000000379
Family TSP-1 type 1 repeat 0.00023
Further Details:      
 
Domain Number 43 Region: 4690-4748
Classification Level Classification E-value
Superfamily TSP-1 type 1 repeat 0.000000000000575
Family TSP-1 type 1 repeat 0.00027
Further Details:      
 
Domain Number 44 Region: 5025-5149
Classification Level Classification E-value
Superfamily Growth factor receptor domain 0.0000000000127
Family Growth factor receptor domain 0.019
Further Details:      
 
Domain Number 45 Region: 5159-5284
Classification Level Classification E-value
Superfamily Growth factor receptor domain 0.0000000000314
Family Growth factor receptor domain 0.015
Further Details:      
 
Domain Number 46 Region: 5341-5457
Classification Level Classification E-value
Superfamily Growth factor receptor domain 0.0000000000424
Family Growth factor receptor domain 0.014
Further Details:      
 
Domain Number 47 Region: 2669-2703,2787-2816
Classification Level Classification E-value
Superfamily Immunoglobulin 0.000000000339
Family I set domains 0.028
Further Details:      
 
Domain Number 48 Region: 786-854
Classification Level Classification E-value
Superfamily Immunoglobulin 0.00000000171
Family I set domains 0.065
Further Details:      
 
Domain Number 49 Region: 2295-2359
Classification Level Classification E-value
Superfamily Immunoglobulin 0.0000000747
Family V set domains (antibody variable domain-like) 0.081
Further Details:      
 
Domain Number 50 Region: 483-522
Classification Level Classification E-value
Superfamily Immunoglobulin 0.0000397
Family I set domains 0.055
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) Protein: ENSCHOP00000003882   Gene: ENSCHOG00000004310   Transcript: ENSCHOT00000004405
Sequence length 5565
Comment pep:novel genescaffold:choHof1:GeneScaffold_4187:3433:332374:1 gene:ENSCHOG00000004310 transcript:ENSCHOT00000004405 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence 
MISWEIVHTVLLFALLYSSLAQDASPESEIRAEEIPEGASTLAFVFDVTGSMYDDLVQVI
EGASKILETSLKRPKRPLFNFALVPFHDPEIGPVTITTDPKKFQYELRELYVQGGGDCPE
MSIGAIKIALEISLPGSFIYVFTDARSKDYRLTHEVLQLIQQKQSQVVFVLTGDCDDRNH
IGYKVYEEIASTSSGQVFHLDKKQVNEVLKWVEEAVQSSKVHLLSTDHLEQAVNTWQIPF
DPSLKEVTVSLSGPSPVIEIRNPLGKLIKKGFGLNELLNIHNSAKVVNVKEPEVGMWTVK
TSSSGRHSVRITGLSTIDFRAGFSRKPTLDFKKTVSRPVQGIPTYVLLNTSGISVPARVD
RLELLSISGSPLKTVPVKYYPDRKPYGIWNISDFIPPNEAFFLEVTGYDKDGYLFQRVSS
VSFSSIVPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXESA
SLSWDIENVTLSDEGSYECIAVSSAGTGRAQTFFDVSEPPPVIQVSNNVTVIPGERAVLT
CLVISAVDYNLTWQRNDRDVRLADPARMRTLANLSLELRGVKFSDAGEYHCVASNEGGAS
AASVFLIVQXXXXXXXXXXXXXXXXGSEVSIMCSATGYPKPKITWTINDMLIMGSHRYRM
TSEGTLFIKNAVPKDAGIYGCLASNSAGTDKQMSTLRYIEAPKLTVVQSELLVALGDTAV
MECKTSGIPLPQVKWFKGDLELRPSTFLMIDPFLGLLKIQEIQDLDAGDYMCVAINGAGR
ATGKITLDVGSSPVFIQEPTDVSMEIGSNVTLPCYVQGYPEPRIKWRRLDNMPIFSRPFS
VSSISQLKTGALFILXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAPLIGISPSVIS
VIEGQQLTLPCTLLAGNPIPERQWIKNSATLVPNPYITVRNDGSLHIERVSLQDGGEYTC
VASNVAGTSNKTTTVDVHVLPTIQHGQQILSTIEGVPITLPCKASGIPKPSIVWSKKGEL
ILTSSAKFSAGADGSLYVVSPGGEESGEYLCTASNAAGYAKRKVQLTVYVRPRVFGDQRG
LSQDKPVEISVIAGEEVTLPCEVKSLPPPVITWAKETQLISPFSPRHMFLPSGSMKITET
RISDSGMYLCVATNIAGNVTQSVKLNVHVPPKIQRGPKLLKVQVGQRMDLPCNAQGTPLP
VVTWFKGGSAVLVDGVQQSSSPHGTLRIDQAVLSDAGIYSCVATNVAGSDETEITLHVQE
PPTLEDLEPPYNTLFQERVANQRIALPCPAKGTPKPIIKWLHNGRELTGREPGISILDDG
ALLVIASVTPFDNGEYVCVAVNEAGTTERKYNLKVLVSPVIKDTEQVTNVSVLVNQQTSL
LCEVEGTPSPVIMWYKEDIQVTKSSTIQIMNNGNILKLFKATPEDAGRYSCKAINIAGTS
QKYFHLGVLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPLYVGDPN
IELLDRGQVLHLKNVRSDKGRYXXXXXXXXXXXXXXXXXXXXXPPSIKGGNVTTEISALI
NSIIKLECETRGLPVPVIIWYKDGQPVISSSQALYVDNGQILQIPRAQIADSATYVCHAT
NVAGTAEKSFHVEIYVPPVIEGDLATPLKKQVIIAHSLTLECKAAGNPPPVLTWLKDGIP
VKASDHIHIEAGGKKLEIINAQEVNRGQYVCVATSVAGEREIKYEVDVLVPPAIEGGHET
SYFIVMVNNLLELDCQVLGSPPPTIMWLKDGQPVDKRDGVKILPNGHKLIIAQAQVSDTG
LYRCVATNTAGDHEKEFEVTVHXXXXXXXXXXXXXXXXXXXXXXXXXXXNGIPNPSITWL
KDGQPVNTAQGNYKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPPSL
EDSGKMLNETVVVNNPIQLECKAAGNPVPAITWFKDNHPLSGTTSVTFLNRGQIVSIESA
QISDAGIYKCVAINSAGATELFYSLQVHVPPSISGSNNMVAVVVNNLVRLECEARGIPAP
SLTWLKDGSPVSSFSNGIQVLSAGRILALTSAQISDTGRYTCVAVNAAGEKQRDIDLRVF
VPPNIVGEEQNVSVLVSQAVQLLCEGDAVPPPTLTWLKDGRPLLKKPGFTISENGSVLKI
EDAQVQDTGRYTCEATNVAGKTEKNYNVNIWVPPNIYDSHELAQLTVIEGTLISLLCESS
GIPPPSLIWKKKDFPVLADSMGHVRILSGGRQLQISIAKKSDTGLYTCVASNVAGTAKKD
YNLKVYPTISSSGSHPTDIIVTRGKSISLECGVQGISPAVTMDRPQGRVGEILEGHIQLK
NVHVSDTGRYVCVAVNVAGMADRKYDSVHAPPNIIGNHGIPENISVVEKNSVSLTCEASG
IPLPSITWLKEGWPINLSSSVRILSGGRTLRLMQTRIEDAGRYTCIVRNTAGEERKIFGL
SVLVPPHIVGENILEDLKVKEKQGITLTCEVTGNPVPEITWHKDGQLLQEDESHHIMSGG
RFLQITNAQMSHSGRYTCLASNTAGDKSKSFSLNVFVSPTIAGVDSDGSPEDVTVILNSP
TSLVCEAYSYPPATITWFKDGAPLESNQNIRILPGGRTLQILNAQEDNAGRYSCVATNEA
GEMIKHYEVKVYIPPIINKSDLLGPGLSPKEVKIKVNNTLTLECEAYAIPSASLSWYKDG
QXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPPSFQKLW
EIGNMLVTGRSGEAKDVVINNPISLYCETNAAPPPTLTWYKDGHPLTSSDRVLILPXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNVHVPPSVIGPNPENLTVVVNNF
ISLTCEFSGIPPPDLSWLKNEQPINPNTNILIVPGGRTLQILQSKTSDGGEYTCIAINQA
GESMNKISLTVYVREGTSVSLECESKAVPRPVVTWYKNGRMLTESAHLEVLADGQRLQVK
KAEVSDTGQYVCRAINVAGRDDKNFHLNVYVLPSIEGPEKEVVVEAISNPVTLTCDATGI
PPPTISWLKNYKPIENSDSLEVHILSGGGKLQIARSQLSDSGNYTCIANIEGKAQKNYIL
SIQVPPSVAGAEMPSEVSVLLGENLELVCNANGIPTPVIQWLRDGKPITSGETERIWVTP
DGSTLNIYGALTADMGKYTCVATNPAGEEDRIFNLNVYVPPVIKGKKKEAEKIMASLGTS
INIECRATGTPLPQINWLKNGLPLPLSSHIRLLSGGQVIRIVRAQVSDVGVYTCVASNRA
GMDNKYYSLQVFVPPSMDNAMGTEEIMIVKGSPTSMTCFADGTPPPSMSWLKDGQPLALD
AHLTTSNQGMVLQLIKADTEDSGRFTCVASNEAGEVTKHFILKVLEPPHIDRSEEPEEIS
VIVSNPFELTCTASGIPAPKIMWMKDGRPLPQIDQVQTLGGGEVLQISSAQVEDTGRYTC
LASSPAGDDDKEYLVRVHVPNIAGIDEPQDFTVLRNRQVTLECKSDAVPPPIITWLKNGK
QLQATPRVRILSGGRYLQINNADLGDTANYTCVASNIAGKTTREFILTVNVPPNIKGGPQ
SLVVHLNKSIILECFAEGVPTPRITWRKDGTVLAGNHARYSILENGFLHIQSAHVTDSGR
YLCMATNAAGTDRRRIDLQVHVSPSIAPGINNITVTVNVQTTLACEATGIPKPSVTWRKN
GHLLNVDQNQNSYRLLSSGSLVIISPSVDDTAAYECTVTNDAGEDKRTVDLTVQVPPSIA
DEPMDFLVTKHTPAVITCTALGVPVPSIHWTKNGIRLLPRGDGYRILSSXXXXXXXXXXX
AGRYTCVARNAAGSAHRHVNFRVEPPVIQPQPSELDVILNNAILLPCEATGLPSPFISWQ
KEGINVITSGKKHAVLPKGGLQISRAVREDAGTYMCVAQNSAGTALGKIKLSVQVPPAIS
PHPKEHVIVVDKPITLPCEVDGLPPPDITWHKDGHAILESLRQRILSSGALQIAFAQPGD
AGQYKCLAANVAGNSTSTKLTVHVPPRIRSTEVHYTVNENSQAVLPCRADGIPTPAINWK
KDNVLLADLLGKYTAEPYGELILKNAVPEDSGTYTCVANNDAGEDTHTISLTVHVLPTFT
ELPGDVSLNKGERLQLSCKATGVPLPKLTWTFNNNIIPAHFDSVSGHSELVIERVSKEDS
GTYVCTAENSVGFVKAIGFVYVKEPPVFKGDYPSNWIEPLGGNAILNCEVNGDPVPSIHW
SRKGVEIEISHRIRQLGNGSLAIYGTVNEDAGDYTCVATNEAGVVERSMSLTLQXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXHGGFSPWSAWRSCSATCGKGIQKRSRLCNNPLPAN
GGKFCQGSDSEVKNCQNKPCPVDGSWSEWSPWEECTRSCGHGNRTRTRTCNNPAAQHGGQ
PCEGSAVEIIMCNIRPCPVHGAWNAWQPWDTCSKSCGKGTQTRTRLCSNPPPSFDGSYCA
GAETQMQVCSERHCPVDGKWATWSSWSACAVSCGGGARRRTRDCSDPAPQDGGSRCEGTD
VQSDFCNNDPCPTHGNWSPWGGWEMCSRTCNGGQMRRHRTCDNPRPSGGGRACVGPDSQI
QRCNTDTCPVDGSWGNWHSWSRCSASCGGGEKTQTRLCNNPVPSKSGRPCPGDATQVSRC
NIQACPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPAM
RKIVSILNPIYWTTAKEIGEAVNGFTLTNAVFKRETQVEFATGEILRMTEIARLDSDGTL
LDITSGHVLQPQSPVDVTVKDYTEDYIQTGPGQLHAYSTRLFTVDGLSIPYTWNHTVFYD
RARGKMPFLVETLHASSVESDYNQLKETLYFKIHSSISKGDRSNQCPSGFALDTVGPFCA
DEDECAAWNPCSHSCHNAMGTYYCSCPEGLTIAADGRMCQDIDECALGGHSCHAGQDCDN
TIGSYRCVVPCGIGFRRTSDGLSCQDINECQESSPCHQRCFNTIGSFHCCEYQLKGKCMD
VNECRQNVCRPDQLCKNTHGGYKCIDLCPNGMTKAENGTCIDIDECKDGIHQCRYNQICE
NMRGSYGCICPRGYRSQGVGRPCLDINECEQVPKPCAHQCSNTPGSFKCICPPGQHLLGD
GKSCAGLERLPNYGTQYNSYNLARFSPMRNNYQPQQHYRQYSHLYSSYSEYRNSRTSLSR
TRRTIRKICPEGSEARHDTCVDIDECENRDTCQHECKNTFGSYQCLCPPGYQLMLNGKTC
QDVDECLEQNVLCGMNRMCFNMRGSYQCIDTPCPPNYQRDPLSGFCLKNCPPNDLECALS
PYALEYKFVSLPFGIAANQDLIRLVAYTQDGVMHPRTSFIMVDEEQTVPFALRDENLKGV
VYTTRPLREAETYRMRVRALSYSASGTIEYQTTFIVYIAVSAYPY
Download sequence
Identical sequences ENSCHOP00000003882 ENSCHOP00000003882

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]
Please cite: Gough, J., Karplus, K., Hughey, R. and Chothia, C. (2001). "Assignment of Homology to Genome Sequences using a Library of Hidden Markov Models that Represent all Proteins of Known Structure." J. Mol. Biol., 313(4), 903-919.

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© Copyright 2013 The SUPERFAMILY authors and Julian Gough.