SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for Aqu1.203795|PACid:15702323 from Amphimedon queenslandica

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  Aqu1.203795|PACid:15702323
Domain Number 1 Region: 13-75
Classification Level Classification E-value
Superfamily Immunoglobulin 0.00000472
Family I set domains 0.066
Further Details:      
 
Domain Number 2 Region: 305-369
Classification Level Classification E-value
Superfamily Immunoglobulin 0.00000774
Family I set domains 0.035
Further Details:      
 
Domain Number 3 Region: 193-254
Classification Level Classification E-value
Superfamily Immunoglobulin 0.00000868
Family I set domains 0.067
Further Details:      
 
Weak hits

Sequence:  Aqu1.203795|PACid:15702323
Domain Number - Region: 98-164
Classification Level Classification E-value
Superfamily Immunoglobulin 0.00684
Family C2 set domains 0.082
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) Aqu1.203795|PACid:15702323
Sequence length 494
Sequence
PAGTRTCISRTGVGYSVRLVCNLSYNNKSVSDVTFSWSTPGGGSQSGSTITASSIGDYTC
TASNPCGSSQATTEVLGRVELIKGESYIYIDQTINIGSWLCINSNISVTVNCNTAFGTNV
TRTWHRRGRVISGVTGSSYKATLSDVERGWLYCEVMNPCGKDVAFSPIFGQAPVTIRGRI
SVLNILDNGCTRPGITNTTGDLCPIEGERVEISCSTTRGYIISGPGGRSSDRPLFIRNFH
LSDSGIYFCTSTYTRCGAAMDSIVVSGSGVPPSISTNLPATTFTLPSTIMNATIPIGFAI
CLLDHQFVTIDCRTESGTEPIRFTWTAASTGSRVIANGMRITVNNTDVYTCSATNAFGTS
TASSTVEHTPAVNVTGEVEGILGNGCSGTDTRKRICAEVGLSITIMCAVGPGDTYTITGP
GESSNNVPLAFTVADNNYGDFTCTSTNPCGNVTDIIRLEKADCSCSIPDVTVSIRKGAGA
MMVSQSLVDSPLTV
Download sequence
Identical sequences Aqu1.203795|PACid:15702323

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]