SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for MDP0000297308 from Malus x domestica

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  MDP0000297308
Domain Number 1 Region: 381-423,484-517,610-656
Classification Level Classification E-value
Superfamily TPR-like 0.0000369
Family Tetratricopeptide repeat (TPR) 0.052
Further Details:      
 
Weak hits

Sequence:  MDP0000297308
Domain Number - Region: 65-500
Classification Level Classification E-value
Superfamily TPR-like 0.000154
Family BTAD-like 0.071
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) MDP0000297308
Sequence length 807
Sequence
MAATLAHSHNSYLYNSTSPPPSLLRKRAAEPKANQSSDQPKFPKLVRGIRKLSKNPSTSI
EPLNNYALKQALQEHVESGSIEDALRVFEKMSHSDTYYWNVMIRGLADNGLFREAIGFYH
RMQREGVRADNYTYPFVIKACGGLLSLDEGQKVHGKLFKVGLDLDVYIGNSLCAAYAKLG
CIEYAERVFDEMPVKDLVSWNSMIGGYAAVGDGWRAMVCFQEMQVLGMKPDRFSMIGGLN
ACAIDCFLQPGKEIHCQVLKCMLESDVMVHTSLIDMYHKCGRVDYAERLFDEICTKNVVV
WNAMIHGYTLNARPLESLSCLKKMQEADKLIPDAITMINFLPSCTQLGALLEGKSIHGYA
IRRGFLPHIVFETALIDLYGACGRINLAERMFGQLIEKNLISWNSMISAYVQSGHNREAL
ELFWDLLNEPLEPDAITFSSIIPAYCEVASIGERKQIHGCITKLEHNSNTLILNATVYMY
AKCGYLEMAREVFDRMIFRDASSWNTIIMAYAIHGFGRISIEFFSKMRDNGIQPNESTFV
SLLTACSVSGMVDEGWKYYNSMKRDYGIDPGIEHCGCMIDLLGRTGNLDRAKIFIEEMSL
LPTARIWGSLLTASRNNRNIELAELAAEHILSSEHDNTGCYILLANMYSEAGRWEDVERL
KSHMKQRGLRKTVACSFVETKCRPYRFINQDTTHVETYMIYAVLDLILRKIGEDKYVHSI
TKFRPMDLKRKRANSAESHSVRLAICFGLISTEIRRPVVVRKNTRICEECHSAAKKISEI
TKREIIVGDSKVFHHFIDGNCSCRDYW
Download sequence
Identical sequences MDP0000297308|PACid:22661135 MDP0000297308 XP_008382446.1.92800

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]