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Domain assignment for MDP0000311389 from Malus x domestica

Domain architecture


Domain assignment details

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Strong hits

Sequence:  MDP0000311389
Domain Number 1 Region: 365-679
Classification Level Classification E-value
Superfamily DNA repair protein MutS, domain III 1.96e-65
Family DNA repair protein MutS, domain III 0.0000941
Further Details:      
 
Domain Number 2 Region: 684-930
Classification Level Classification E-value
Superfamily P-loop containing nucleoside triphosphate hydrolases 1.49e-50
Family ABC transporter ATPase domain-like 0.00000671
Further Details:      
 
Weak hits

Sequence:  MDP0000311389
Domain Number - Region: 225-377
Classification Level Classification E-value
Superfamily DNA repair protein MutS, domain II 0.000392
Family DNA repair protein MutS, domain II 0.0061
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) MDP0000311389
Sequence length 1723
Sequence
MELVSDPKFLIGDMTTLYRHACYLRFYSRCCTFMLPVRKALAVLLPNFEARGAPFSGRRV
ESPNRESAMDANFEDHSKLPELKLDAKQSQGFLSFFKTLPNDSRAIRLFDRRDYYTAHGE
NATFIAKTYYRTTTALRQLGSGSNGLSSVSVSKNMFETITRDILLERTDHTLEIYEGSGS
SWKLVKSGTPGNLGSFEDVLFANNEMQDTPVVVALLPNFRENGCTVGLGYVDLTKRVLGL
AEFIDDSHFTNVESALVALGCKECLLPLESGKTSEIRTLHDALSRCGVMLTERKKTEFKM
RDLVQDLGRLVKGSIEPVRDFVSGFEFAPGALGALLSYAELLADESNYGNYSIQRYNLDS
YMRLDSAAMRALNVLESKTDANKNFSLFGLMNRTCTAGMGKRLLHMWLKQPLLDVNEINS
RLDLVQAFVEDPALRQDLRQHLKRISDIERLMHNLEKKRAGLQHIVKLYQSCIRLPYIKS
ALERYDGQFSSLTKERYWEPLELWTDDRHLNKFIALVEAAVDLDQLENGEYMISSGYDPA
LSALNEEQESLEHQIQNLHKQTANDLDLALDKALKLDKGTQFGHVFRITKKEEPKIRKKL
TTQFIVLETRKDGVKFTNTKLKKLGDQYQRIVEEYKSCQKELVNRVIQTTTTFSEVFWSV
AGLLSELDVLLSFADLASSCPTPYTRPVITPPDEGDIILEGSRHPCVEAQDWVNFIPNDC
KLVRGKSWFQIITGPNMGGKSTFIRQVGVNILMAQVGCFVPCDSASISVRDCIFARVGAG
DCQLRGVSTFMQEMLETASILKGATDKSLIIIDELGRGTSTYDGFGLAWAICEHLVEVIK
APTLFATHFHELTALAHENVVEDTNMKQIVGVANYHVSAHIDSSSRKLTMLYKVEPGACD
QSFGIQVAEFANFPESVVSLAREKAAELEDFSATTVTPNDATEEVGLKRKREHDTGDTTK
GAARAHKFLEEFSNLPLETMDLKQALQRVCKMKDELQKDAANSQWLQQLREEISILTSWA
VTIGHLKLYALGAVTPTQRRRFTVMMNWRRVLKSVQALAAHSLLFSFTLLLVLKLDGVAA
SYSWWIIFFPLWIFHAVVARGRFSLPAPSVPHSRHWAPCHAIAATPLLVAFELLLCIYLE
SVSVWLKKCPVTKRISPLHNGMSPSLQCTDMAVLSRITYRIREWIQYASDTVGYALDTYL
YQRIRHLTDEYGYPTVWIRISPPWPFDTIWMCRALMPGDDESMSDETIWETLPHFWVAIS
MVFFVAATVFTLLKLCGDVDALGWWDLFINFGYSFCASCAYISYFAQCFAFLVCTKWSNP
VIHRSAHSREATSSSTTIRYLDWNSGLVVSAEEDQNHDRMCGLQDIGGHLMKIPVIGFQV
LLCMRLEGTPANARHIPLPVLFSPLFLLQGAGVLLSACRLVEKIVLLLRTEAGTGLYFRF
SSRAHDCFGFLHRGSRLLGWWSIDERSPEEDARLFHEGASGYNTFSGYPPEIVKKMPKKD
LTEEVWRLQAALGEQTEITKYSQQEYERLQNRMRMCYFIFRIWRSSIVIEIFYDTLLVRK
KCYVAFALRERSAWSCYHVDIASFADVFVLIVFQYRAVPALTSVKSARYAVNQSRSAYLS
MMFRFESTLRRIMFTIWNWVKNEDASCDTFFRTVSRNGITPSNGAGCAVRRCPVFLQNST
ISLRSLRLGASLFFQQWSLHYRLRNWQMKAASLPQCKTFIVIV
Download sequence
Identical sequences MDP0000311389|PACid:22642097 MDP0000311389

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