SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for MDP0000811127 from Malus x domestica

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  MDP0000811127
Domain Number 1 Region: 152-431
Classification Level Classification E-value
Superfamily P-loop containing nucleoside triphosphate hydrolases 8.56e-64
Family RecA protein-like (ATPase-domain) 0.056
Further Details:      
 
Domain Number 2 Region: 497-883
Classification Level Classification E-value
Superfamily L domain-like 1e-38
Family Internalin LRR domain 0.017
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) MDP0000811127
Sequence length 946
Sequence
MAESAVNFVLDKIKPFFENGVQLLRGVRAELVYLKGELERMRALLRDADAMEESDEELKV
WVKQVRNVAYDAEDLLDEFAILQAYNSQSVQMYCPYYRLCGCVKDLKAHYRVAWELQSIN
TRIRDIFAVYKRLLPKLNAVKGSIFNNPGDTWHDRREDALLLENTDVVGIHKRKKKLVRM
LVEGGSGLEVVSVTGMGGMGKTTLVKKVYDDDEVKKHFKPRAWITVSQSFRVEDLLKDII
HKLFDAIRRPVPEGVHDKNSNELKAIIKXFLQKRRYLIVLDDVWHADKWETVKYALPKGR
FGSRIMLTTRNAVFTTCSESKSKVYHLKPLPADESWKLFIKKAFLGKPCPPYLVERCQGI
VKRCEGLPLAIVAISGVLATKDKRRIDEWDFICRSLGAELHGNNKLEDLKKVLSLSFNDL
PYYLKACFLYLSLFPEGHLIRRMRLIRLWIAEGFVEAIEGRTLEEVAEDYLKELLNRNLI
LVGDTTSDGRVKTYRLHGLLREIIISKSRDQNFAAIVKDQNTIWPDRVRRLSIHNALDTV
QEKRSVPQLRSLFMFGAVARSSMXKYFATGFRLLGVLDLEAAPLKKFPREILDLFYLKYL
SLRKTQVKFIPRSIGNLSNLETLDLKKTNVTELPLEILKLQKLRHLLVYRLKNESYAHFY
SKFGFSALSNIGELQSLQKLCFIEANDQSCGMTMRELGKLKQLRRLGIMKLRKQDGLALC
LSIESLTKLRALSVTSTGESEVIDLHHISSPPQFLERLYLIGRLEEMPNWIPSLNSLARL
FLKWSQLEDDPLVHLQDLPNLIHLELLHACDSDMLSFNGRGFKKLKVLGLDKFDKLQCVK
VEEGAMPCLEKLTIQRCKSMKRVPSGVKHLTKLKLLEFFEMPNELILKLRPDGEGEDYEE
VQHIPDVYSAYWRDGGWDVYSIESFGEIENAPVRRRHDQLRPLWKV
Download sequence
Identical sequences XP_008373505.1.92800 MDP0000811127 MDP0000811127|PACid:22640178

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]