SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for MDP0000600288 from Malus x domestica

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  MDP0000600288
Domain Number 1 Region: 48-159
Classification Level Classification E-value
Superfamily alpha-D-mannose-specific plant lectins 3.27e-25
Family alpha-D-mannose-specific plant lectins 0.0046
Further Details:      
 
Weak hits

Sequence:  MDP0000600288
Domain Number - Region: 330-365
Classification Level Classification E-value
Superfamily Hairpin loop containing domain-like 0.0942
Family Pan module (APPLE domain) 0.073
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) MDP0000600288
Sequence length 401
Sequence
MDQXVKDGDLLVSKENXFALGFFSPRNSSSRYVGIWYAXKDEKDQKAVVWVANRNDPIND
TSGVLTIDRYGRLLLYSNNMQNXPVXSTNVTVQTASTSCXAQLLDSGNLVLFRDNKSKNF
MWQSFDYPTDTXXPGMKLGXNWKLGIEWVLTSWKSQDDPGTGEYTXXLYSNXTATPEXXX
FYKGLTPXXRSDPXDVXTFVSNQXEMYYFLKNDSTSTRVVLKDSGLLQHLXWNNADREWK
ELWSXPKYXCDXYGECGANSKCSPDNIXXFXCECXPGYEPKSVNDWXMRDGSDGCVSKRX
AVSKCRNGEGFMKXXRVKDPDTTKAARLKKGISIKECEQXCLSNCSCTAYTVIESEGRXD
CLTWYGELLDILVXXXXGXDLXVRVDKIELGTTSXHGKVAL
Download sequence
Identical sequences MDP0000600288|PACid:22654029 MDP0000600288

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]