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Domain assignment for Solyc01g008960.2.1 from Solanum lycopersicum v2.3

Domain architecture


Domain assignment details

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Strong hits

Sequence:  Solyc01g008960.2.1
Domain Number 1 Region: 546-868
Classification Level Classification E-value
Superfamily Ribonuclease H-like 1.26e-81
Family PIWI domain 0.015
Further Details:      
 
Domain Number 2 Region: 271-434
Classification Level Classification E-value
Superfamily PAZ domain 2.2e-44
Family PAZ domain 0.00019
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) Solyc01g008960.2.1
Sequence length 909
Comment genomic_reference:SL2.40ch01 gene_region:2976372-2984961 transcript_region:SL2.40ch01:2976372..2984961+ go_terms:GO:0019899 functional_description:"Argonaute 4-like protein (AHRD V1 ***- D5FQ91_PELHO); contains Interpro domain(s) IPR003165 Stem cell self-renewal protein Piwi "
Sequence
MAEEETNGAAAEGLPPPPPVPPDFTPAKTEIEPVKKKILRVPMARRGVGNKGQKIQILTN
HFKVNVNNVDGHFFHYSVALFYEDGRPVDGKGVGRKVLDTVHETYDTELAGKDFAYDGEK
SLFTIGALPRNKMEFTVVLDDVISNRNNGNSSPGGHGSPNEADRKRLRRPYQSKTFKVEI
SFAAKIPMQAIANALRGQESENSQEALRVLDIILRQHAAKQGCLLVRQSFFHNDPKNFVD
VGAGVLGCRGFHSSFRTTQSGLSLNIDVSTTMIIQPGPVVDFLIANQNAKDPFSLDWAKA
KRVLKNLRVKTTPTNQEYKITGLSDRPCREQLFTLKQKGKDADGEVQTTEVTVFDYFVNH
RNIELRYSADLPCINVGKPKRPTFFPIELCSLVSLQRYTKSLSTFQRSSLVEKSRQKPQE
RMQVLSNALKINQYDAEPLLRSCGISISNNFTQIEGRVLPPPKLKTGGDDFVPRNGRWNF
NNKRLVDPTKIERWAVVNFSARCNVQGLVSDLIKCGKQKGIMVEDPFDVFEESPQVRRAP
PLVRVEKMFEQVQSKLPGAPKFLLCLLPERKNCDVYGPWKRKNLAEYGIVTQCIAPTRVN
DQYITNVLLKINAKLGGLNSMLTVEHSPAIPMVSKVPTIILGMDVSHGSPGQSDVPSIAA
VVSSRQWPSISRYRASVRTQSPKVEMIDNLFKRTSDTEDDGIMREALLDFYVSSGKRKPE
HIIIFRDGVSESQFSQVLNVELDQIIEACKFLDEKWSPKFVVIVAQKNHHTKFFQPNDPN
NVPPGTIIDNKVCHPRNYDFYLCAHAGMIGTTRPTHYHVLYDELGFSADDLQELVHNLSY
VYQRSTTAISVVAPICYAHLAATQMGQWMKFEDASETSSSHNGVTNAGPVSVPQLPKLEE
KVSSSMFFC
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Identical sequences K4AT92
Solyc01g008960.2.1 Solyc01g008960.2.1 NP_001266156.1.44838 Sopim01g008960.0.1

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