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Domain assignment for Solyc01g034000.1.1 from Solanum lycopersicum v2.3

Domain architecture


Domain assignment details

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No Significant Hits.

Weak hits

Sequence:  Solyc01g034000.1.1
Domain Number - Region: 689-719
Classification Level Classification E-value
Superfamily Retrovirus zinc finger-like domains 0.00146
Family Retrovirus zinc finger-like domains 0.0069
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) Solyc01g034000.1.1
Sequence length 720
Comment evidence_code:10F0H1E0IEG genomic_reference:SL2.40ch01 gene_region:35655687-35658495 transcript_region:SL2.40ch01:35655687..35658495+ go_terms:GO:0008270 functional_description:"Mutator-like transposase (AHRD V1 *-*- Q9FH43_ARATH); contains Interpro domain(s) IPR018289 MULE transposase, conserved domain "
Sequence
MTSFEHNVMVALYWGGEIITDMNGFRYTECARMIISMSTSTTYVELVGLLHEKMGTYSEN
IHMDISGKYPCSIQGNNTRFIEFKIENDQSLLQFLFIPQKFADKIDINILEMYVKTVSTD
QNVAFQVSGNHGYHMNLLAQNYGLTTINQPHFVEPIVQPPFQQLLMHDHQSFGEGSSSQM
HIDNSHMEYEARDIDINVDLYNDVNAEISDESSEEDEPPKDGDESEPDEDIDDIRDFSQN
DVNLHNHDQGVSHDIPYFRTLENEEDIFMSTCESEMECCSVWSEQAKKDLKKGMLFSSKE
KLKMAVTIWSLRKNKEFKLFNTLTMEQLWNGNYEESMSSSEVKTFKFVFWAFKPCIDGFQ
TCLPVISVDGTHIYGKYEIKLLIAVGIDGNDNILPLAFAIVDKESKEAWKWFFRNLSAHV
IKSRQNVCVISDRAKGILTSLQELRRFQELMWRAASAHQVRKFESMMWQIKEENIEAHAY
LMEIPLDKWTFSHDNGKKWGVLTTNLSESLNGVLKKARGLPVTAMIRLSLEQTIERYTRR
SQIAHQLVEQNELWIGRFKIKWEKNYESSKRHFVFYWNIPTGVYEVRSIKVDGIGGNPHY
VSLNERKCDCGKCVNLHFPCSHVMKVTDRMGGLARNFVSEHFTIENYVATYSWSFSPIGH
ESYWPSPSFTMRSNEFYRRPNRPRTTRIHNEMDRSSTVYERACGLCRQTGHDRRQCPNRN
Download sequence
Identical sequences K4AV82
Solyc01g034000.1.1 Solyc01g034000.1.1 Sopim01g034000.0.1

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