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Domain assignment for Solyc03g120380.2.1 from Solanum lycopersicum v2.3

Domain architecture


Domain assignment details

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Strong hits

Sequence:  Solyc03g120380.2.1
Domain Number 1 Region: 81-170
Classification Level Classification E-value
Superfamily CAD & PB1 domains 6.47e-22
Family PB1 domain 0.023
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) Solyc03g120380.2.1
Sequence length 192
Comment genomic_reference:SL2.40ch03 gene_region:62855821-62857611 transcript_region:SL2.40ch03:62855821..62857611+ go_terms:GO:0003700 functional_description:"Auxin response factor 9 (AHRD V1 *-** ARFI_ARATH); contains Interpro domain(s) IPR003311 AUX/IAA protein "
Sequence
MATELEITELRLGLPGGILEKNEKKRVYSEITTSDRNSSSSNNNNNVEANNYKCQYKNEV
VGWPPVCAYRKKNSFNGREAESNNKMYVKVSMDGAPFLRKVDLSTHKGYDQLVMALEKLF
DCYGIGEALEDADKSEFVPIYEDKDGDWMLVGDVPWIMFSESCKRLRIMKRSEAKVIGLG
ARDFLKGMSQEK
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Identical sequences G9HPW6
Solyc03g120380.2.1 Sopim03g120380.0.1 NP_001266080.1.44838 Solyc03g120380.2.1

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