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Domain assignment for Solyc03g120500.2.1 from Solanum lycopersicum v2.3

Domain architecture


Domain assignment details

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Strong hits

Sequence:  Solyc03g120500.2.1
Domain Number 1 Region: 155-259
Classification Level Classification E-value
Superfamily CAD & PB1 domains 8.83e-22
Family PB1 domain 0.022
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) Solyc03g120500.2.1
Sequence length 278
Comment genomic_reference:SL2.40ch03 gene_region:62930712-62932827 transcript_region:SL2.40ch03:62930712..62932827- go_terms:GO:0005515,GO:0003700 functional_description:"Auxin responsive protein (AHRD V1 ***- D9IQE6_CATRO); contains Interpro domain(s) IPR003311 AUX/IAA protein "
Sequence
MSVPLEHDYIGLSEPSLMERSSDKISSSSSSSVLNLKETELRLGLPGSESHGVSLFGKDL
DPLSNFTSRTKRGFSDAIDASGKSDLSINCRSEADRENGNLLFSPKRGNGGSNPVEEKKP
IPHTSKAQVVGWPPIRSFRKNTLATKKNDDEGRTGSSCLYVKVSMDGAPYLRKVDIKTYS
NYAALSSALEKMFSCFSIGQCASDKIPGQEKLSESHLMDLLNGSEYVLTYEDKDGDWMLV
GDVPWEMFIDSCKRLRIMKSSEAIGLAPRAINKCKNQN
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Identical sequences G9HPX1
Solyc03g120500.2.1 Solyc03g120500.2.1 NP_001266034.1.44838

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