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Domain assignment for Solyc04g054280.1.1 from Solanum lycopersicum v2.3

Domain architecture


Domain assignment details

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Strong hits

Sequence:  Solyc04g054280.1.1
Domain Number 1 Region: 71-154
Classification Level Classification E-value
Superfamily CAD & PB1 domains 7.36e-21
Family PB1 domain 0.024
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) Solyc04g054280.1.1
Sequence length 166
Comment evidence_code:10F0H1E0IEG genomic_reference:SL2.40ch04 gene_region:51421878-51423364 transcript_region:SL2.40ch04:51421878..51423364+ go_terms:GO:0003700 functional_description:"Auxin responsive protein (AHRD V1 ***- D9IQE6_CATRO); contains Interpro domain(s) IPR003311 AUX/IAA protein "
Sequence
MERDLNLRLGLPGREEDQYDHQQIMSISKNNKRALSEYEDDEATTPRVTKVQIVGWPPVR
CYRKNTLQNTTKQTEDQCGIYVKVSMDGAPFCRKIDLKMYKCYTQLLKAMEKMFKLKKGE
FSPTYEDKDGDLMLVGDVPWEMFMSSCKRLRIMKRSEARGLGSCGL
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Identical sequences G9HPW9
Solyc04g054280.1.1 NP_001266085.1.44838 Solyc04g054280.1.1

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